RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 TTYH2Q9BSA4 534 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 ADAM21Q9UKJ8 722 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 VDAC3Q9Y277 283 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 MED12LQ86YW9 2145 aa11.2□□□□□ -0.62
RNF40-211ENST00000567365 CENPEQ02224 2701 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 CD8B2A6NJW9 211 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 H0YC42 278 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 GTPBP1O00178 669 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 FAAHO00519 579 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 GMFGO60234 142 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 UBTFL6P0CB48 400 aaPredicted RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 PEPDP12955 493 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 IL11P20809 199 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 TCEA1P23193 301 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 SLC6A2P23975 617 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 CEACAM8P31997 349 aaPredicted RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 EIF1P41567 113 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 SUCLG1P53597 346 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 TPD52P55327 224 aaPredicted RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 NUP107P57740 925 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 FOXF1Q12946 379 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 CTU2Q2VPK5 515 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 RABL3Q5HYI8 236 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 ZNF585AQ6P3V2 769 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 RPTNQ6XPR3 784 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 B3GNT6Q6ZMB0 384 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 ZNF836Q6ZNA1 936 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 SERPINA11Q86U17 422 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 COMTD1Q86VU5 262 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 PEX5LQ8IYB4 626 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 ZZZ3Q8IYH5 903 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 EID3Q8N140 333 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 CLIP4Q8N3C7 705 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 NFKBIDQ8NI38 313 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 BBS10Q8TAM1 723 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 ST8SIA1Q92185 356 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 RCN3Q96D15 328 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 RNF145Q96MT1 663 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 TUBA1CQ9BQE3 449 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 THUMPD3Q9BV44 507 aaKnown RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 CLCF1Q9UBD9 225 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 CAMK2AQ9UQM7 478 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 ZNF443Q9Y2A4 671 aaPredicted RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 GPC6Q9Y625 555 aaPredicted RBP11.19□□□□□ -0.62
RNF40-211ENST00000567365 AP4B1Q9Y6B7 739 aa11.19□□□□□ -0.62
RNF40-211ENST00000567365 INTS1Q8N201 2190 aaKnown RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 UNC79Q9P2D8 2635 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 CELSR2Q9HCU4 2923 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 MBD3L4A6NDZ8 208 aaPredicted RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 MBD3L3A6NE82 208 aaPredicted RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 MBD3L5A6NJ08 208 aaPredicted RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 AP3D1O14617 1153 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ADAMDEC1O15204 470 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 FAM107AO95990 144 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 PABPC4LP0CB38 370 aaKnown RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 ESRRAP11474 423 aaPredicted RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 IL7RP16871 459 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ELK4P28324 431 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 PRDX6P30041 224 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 PCGF2P35227 344 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 GCKP35557 465 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ACAA2P42765 397 aaKnown RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 CRYBA2P53672 197 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 SESN3P58005 492 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 RAC1P63000 192 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 CBFBQ13951 182 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 SCARB2Q14108 478 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 QPRTQ15274 297 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ZSWIM7Q19AV6 140 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 RIPPLY2Q5TAB7 128 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 TMEM211Q6ICI0 200 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 REEP3Q6NUK4 255 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 POMZP3Q6PJE2 187 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 HACD2Q6Y1H2 254 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ZNF808Q8N4W9 903 aaPredicted RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 PCYOX1LQ8NBM8 494 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 C11orf65Q8NCR3 313 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 HIPK4Q8NE63 616 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 OR10A6Q8NH74 314 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 MBD3L2Q8NHZ7 208 aaPredicted RBP11.18□□□□□ -0.62
RNF40-211ENST00000567365 SLC35B4Q969S0 331 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ZNF583Q96ND8 569 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 SPATA9Q9BWV2 254 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 CALHM2Q9HA72 323 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 ACER3Q9NUN7 267 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 RLIMQ9NVW2 624 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 PRDM4Q9UKN5 801 aa11.18□□□□□ -0.62
RNF40-211ENST00000567365 A0A0G2JNJ9 132 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 TMEM247A6NEH6 219 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 CLDN1O95832 211 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 PGCP20142 388 aa11.17□□□□□ -0.62
RNF40-211ENST00000567365 POU3F2P20265 443 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms