RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	TREX2	Q9BQ50	279 aa	Predicted RBP	7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	KLHDC3	Q9BQ90	382 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	NANOG	Q9H9S0	305 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	CALHM2	Q9HA72	323 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	PNPLA3	Q9NST1	481 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	MED17	Q9NVC6	651 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	STOML1	Q9UBI4	398 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	ADAM21	Q9UKJ8	722 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF232	Q9UNY5	417 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	CARD8	Q9Y2G2	431 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	AP3M1	Q9Y2T2	418 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	GPC6	Q9Y625	555 aa	Predicted RBP	7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	AP4B1	Q9Y6B7	739 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	TENM4	Q6N022	2769 aa		7.27	□□□□□ -1.25
RNF31-222	ENST00000560631	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	C15orf38-AP3S2	A0A0A6YYH1	394 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	LOC100653049	A0A140TA62	436 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CD8B2	A6NJW9	211 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	FAM47E-STBD1	D6RA91	191 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNHIT1	O43257	154 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	OIP5	O43482	229 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	KRT34	O76011	436 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	AGFG2	O95081	481 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	FAM107A	O95990	144 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	BCHE	P06276	602 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ESRRA	P11474	423 aa	Predicted RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	IL7R	P16871	459 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF708	P17019	499 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	PGC	P20142	388 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	SLC6A2	P23975	617 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ELK4	P28324	431 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	TIMP3	P35625	211 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	SLC6A8	P48029	635 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CLDN18	P56856	261 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	PCBP3	P57721	371 aa	Known RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	RAC1	P63000	192 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ADORA2A-AS1	P86434	159 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CBFB	Q13951	182 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	LARS2	Q15031	903 aa	Known RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	LIN52	Q52LA3	116 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	DCST1	Q5T197	706 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	C1orf185	Q5T7R7	199 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	RIPPLY2	Q5TAB7	128 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	RNF220	Q5VTB9	566 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	NSUN5P2	Q63ZY6	315 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	REEP3	Q6NUK4	255 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	C8orf82	Q6P1X6	216 aa	Predicted RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ARSK	Q6UWY0	536 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CALHM3	Q86XJ0	350 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	PTOV1	Q86YD1	416 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	TREML1	Q86YW5	311 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	SLC30A8	Q8IWU4	369 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF808	Q8N4W9	903 aa	Predicted RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF614	Q8N883	585 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	C11orf65	Q8NCR3	313 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	HIPK4	Q8NE63	616 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	OR5M9	Q8NGP3	310 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	OR52P1P	Q8NH57	321 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	POC1B	Q8TC44	478 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	WDR60	Q8WVS4	1066 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ITLN2	Q8WWU7	325 aa	Predicted RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ST8SIA1	Q92185	356 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CMTM5	Q96DZ9	223 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CCDC120	Q96HB5	630 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	MRGPRX4	Q96LA9	322 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	SFXN2	Q96NB2	322 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	GPATCH1	Q9BRR8	931 aa	Known RBP	7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	TTYH2	Q9BSA4	534 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	FAM107B	Q9H098	131 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	EVA1A	Q9H8M9	152 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ACER3	Q9NUN7	267 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ARMCX1	Q9P291	453 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF337	Q9Y3M9	751 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	FAM215A	Q9Y5M1	114 aa		7.26	□□□□□ -1.25
RNF31-222	ENST00000560631	CDHR4	A6H8M9	788 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	MBD3L3	A6NE82	208 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	MBD3L5	A6NJ08	208 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	BCAS1	O75363	584 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	DCTN3	O75935	186 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	PABPC4L	P0CB38	370 aa	Known RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	UBTFL6	P0CB48	400 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	PRKCA	P17252	672 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	FKBP2	P26885	142 aa	Known RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	PRKAR1B	P31321	381 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	CEACAM8	P31997	349 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF41	P51814	821 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	SMS	P52788	366 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	CLDN15	P56746	228 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	EEFSEC	P57772	596 aa	Known RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	SESN3	P58005	492 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	EEF1A1	P68104	462 aa	Known RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	SCARB2	Q14108	478 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	SELPLG	Q14242	412 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	NDUFAF6	Q330K2	333 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	ACSF3	Q4G176	576 aa	Predicted RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	MRPL2	Q5T653	305 aa	Known RBP	7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	RAET1L	Q5VY80	246 aa		7.25	□□□□□ -1.25
RNF31-222	ENST00000560631	ZNF585A	Q6P3V2	769 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms