RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 METTL17Q9H7H0 456 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 ZNF696Q9H7X3 374 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 CXorf36Q9H7Y0 433 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 UBQLN4Q9NRR5 601 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 DDX18Q9NVP1 670 aaKnown RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 FBXO9Q9UK97 447 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 PPP2R2CQ9Y2T4 447 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SNX24Q9Y343 169 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 SLC25A15Q9Y619 301 aa4.55□□□□□ -1.68
SPG11-208ENST00000558155 GPC6Q9Y625 555 aaPredicted RBP4.55□□□□□ -1.68
SPG11-208ENST00000558155 IGHV3-15A0A0B4J1V0 119 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 A0A1W2PQD3 144 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 A0A1W2PR80 420 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 LRP5LA4QPB2 252 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 CCDC151A5D8V7 595 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 B9A039 149 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 H3BNH8 94 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 GTPBP1O00178 669 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 MANBAO00462 879 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 GPR171O14626 319 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TP73O15350 636 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TPD52L2O43399 206 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 EFNA2O43921 213 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 CYTIPO60759 359 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 NKX2-2O95096 273 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 STAMBPO95630 424 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 NUDT14O95848 222 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 IGKV1D-16P01601 117 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 ERCC1P07992 297 aaPredicted RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 ANXA4P09525 319 aaPredicted RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 TACSTD2P09758 323 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 IFI6P09912 130 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 COX5AP20674 150 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 DDCP20711 480 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 PAX7P23759 505 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 APEX1P27695 318 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 SHC1P29353 583 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 SLC7A1P30825 629 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 NTSP30990 170 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 STX2P32856 288 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 SERPINF1P36955 418 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 LIMS1P48059 325 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 SERPINB4P48594 390 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 DVL1P1P54792 670 aaPredicted RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 CDH13P55290 713 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 RAE1P78406 368 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 DEFA6Q01524 100 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TGFBR3Q03167 851 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 BTKQ06187 659 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 LGALS3BPQ08380 585 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 SPOCK1Q08629 439 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 PDK3Q15120 406 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 GABRA6Q16445 453 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TUSC1Q2TAM9 212 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 PRR31Q5SQ13 230 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 B3GLCTQ6Y288 498 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 C1orf229Q6ZS94 237 aaPredicted RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 SLC46A3Q7Z3Q1 461 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 MTERF4Q7Z6M4 381 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 PEG10Q86TG7 708 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 OR2L13Q8N349 312 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TEX29Q8N6K0 151 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 CDRT4Q8N9R6 151 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 GATSQ8NAP1 163 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TOR1AIP2Q8NFQ8 470 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 PHOSPHO1Q8TCT1 267 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 ZFP90Q8TF47 636 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 NEU4Q8WWR8 484 aaPredicted RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 PIK3R3Q92569 461 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 APH1AQ96BI3 265 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 MRGPRX4Q96LA9 322 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 NSUN5Q96P11 429 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 GPR78Q96P69 363 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 SORCS2Q96PQ0 1159 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 PSD2Q9BQI7 771 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 BPESC1Q9GZL8 116 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 HOXD1Q9GZZ0 328 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 VPS11Q9H270 941 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 GLIPR2Q9H4G4 154 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 MIEF1Q9NQG6 463 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 ASB6Q9NWX5 421 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TAS2R16Q9NYV7 291 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 TAS2R7Q9NYW3 318 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 EMC3Q9P0I2 261 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 ING1Q9UK53 422 aaPredicted RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 PCTPQ9UKL6 214 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 SNX12Q9UMY4 172 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 PCDHB10Q9UN67 800 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 WBP11Q9Y2W2 641 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 NOSIPQ9Y314 301 aaKnown RBP4.54□□□□□ -1.68
SPG11-208ENST00000558155 PCDHB14Q9Y5E9 798 aa4.54□□□□□ -1.68
SPG11-208ENST00000558155 A0A1W2PNR3 127 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 B4DSR2 109 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 CCDC188H7C350 402 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 SULT2B1O00204 365 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 PPP6CO00743 305 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 OIP5O43482 229 aa4.53□□□□□ -1.68
SPG11-208ENST00000558155 MRPL33O75394 65 aaKnown RBP4.53□□□□□ -1.68
SPG11-208ENST00000558155 OR4F21O95013 312 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms