RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 IL7RP16871 459 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 PGCP20142 388 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 CTSSP25774 331 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 PSMA4P25789 261 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 COL8A1P27658 744 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 PGM1P36871 562 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SLC6A8P48029 635 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 CCR4P51679 360 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 EEF1A1P68104 462 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SKP2Q13309 424 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 MAPK14Q16539 360 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 NDUFAF6Q330K2 333 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 EEF1A1P5Q5VTE0 462 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 PRAMEF8Q5VWM4 474 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 PRAMEF7Q5VXH5 474 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 METTL25Q8N6Q8 603 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 FAM71CQ8NEG0 241 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SLC38A5Q8WUX1 472 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 WDR60Q8WVS4 1066 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 ST8SIA1Q92185 356 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 MRGPRX4Q96LA9 322 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 THUMPD3Q9BV44 507 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 EXOSC3Q9NQT5 275 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 SLC25A37Q9NYZ2 338 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
SLIRP-211ENST00000557623 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 USP9YO00507 2555 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
SLIRP-211ENST00000557623 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 A0A0G2JPF8 293 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 SLC22A20A6NK97 555 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 KDM4EB2RXH2 506 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 HNRNPCL2B2RXH8 293 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 HNRNPCL3B7ZW38 293 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 C5orf58C9J3I9 102 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 DYNC1I1O14576 645 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 HNRNPCL1O60812 293 aaKnown RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 DNAJA2O60884 412 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 HNRNPCL4P0DMR1 293 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 PRKCAP17252 672 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 RPS4Y1P22090 263 aaKnown RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 GRNP28799 593 aaKnown RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ADSLP30566 484 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 OPRM1P35372 400 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 SUCLG1P53597 346 aaKnown RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 CLDN20P56880 219 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 FOXF1Q12946 379 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 QPRTQ15274 297 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 MAPRE2Q15555 327 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 SGCBQ16585 318 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ZSWIM7Q19AV6 140 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 SLC25A53Q5H9E4 307 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 OR2A2Q6IF42 318 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ESPNLQ6ZVH7 1005 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 GGNQ86UU5 652 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 DPP10Q8N608 796 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 POC1BQ8TC44 478 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ZG16BQ96DA0 208 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF317Q96PQ6 595 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 PINK1Q9BXM7 581 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ARMC7Q9H6L4 198 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 A4GALTQ9NPC4 353 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF232Q9UNY5 417 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF175Q9Y473 711 aa11.25□□□□□ -0.61
SLIRP-211ENST00000557623 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 TRBV5-3A0A0A0MS03 114 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 ETV2O00321 342 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 CRHP06850 196 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 THBS1P07996 1170 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 FCGR2AP12318 317 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 NID1P14543 1247 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 COX6B1P14854 86 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 GPX2P18283 190 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 BMP5P22003 454 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF136P52737 540 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 CLDN15P56746 228 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 SELENBP1Q13228 472 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 NFYCQ13952 458 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 MAPK11Q15759 364 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 TOMM34Q15785 309 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-211ENST00000557623 LIN52Q52LA3 116 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 RUNDC3AQ59EK9 446 aa11.24□□□□□ -0.61
SLIRP-211ENST00000557623 GCNT6Q5T4J0 391 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms