RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CIB2O75838 187 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 IGHG3P01860 377 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF17P17021 662 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ATP6V1B2P21281 511 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF136P52737 540 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 PLPPR5Q32ZL2 321 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 CYP2R1Q6VVX0 501 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 FKBP9P1Q75LS8 142 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 COMTD1Q86VU5 262 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 CISD2Q8N5K1 135 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 NR4A3Q92570 626 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 UTP4Q969X6 686 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 HSH2DQ96JZ2 352 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 MRGPRX4Q96LA9 322 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF559Q9BR84 538 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TRIM2Q9C040 744 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 POLR2J2Q9GZM3 115 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 POLR2J3Q9H1A7 115 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TAS2R10Q9NYW0 307 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 SH3GLB1Q9Y371 365 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TCRBV5S2A0A599 114 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TTLL8A6PVC2 850 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 SUSD5O60279 629 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ZIC3O60481 467 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 HCN1O60741 890 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ADAM11O75078 769 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TRAPPC6AO75865 159 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 PRKD3O94806 890 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 GKN3PP0CG01 181 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 UMPSP11172 480 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 RYKP34925 604 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 GCKP35557 465 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 SLC1A3P43003 542 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 HTR3AP46098 478 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 QPRTQ15274 297 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TOMM20Q15388 145 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 TMEM44Q2T9K0 475 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 CMPK2Q5EBM0 449 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 WBP2NLQ6ICG8 309 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ARSKQ6UWY0 536 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 CARM1Q86X55 608 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 GTPBP8Q8N3Z3 284 aaPredicted RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 FAM83FQ8NEG4 500 aaPredicted RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ZNF563Q8TA94 476 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 SNRNP40Q96DI7 357 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 PIGQQ9BRB3 760 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 UGT2B28Q9BY64 529 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 MAGIXQ9H6Y5 334 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 PLSCR2Q9NRY7 297 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 ACER3Q9NUN7 267 aa14.92□□□□□ -0.02
SPTLC2-203ENST00000554901 AP3D1O14617 1153 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 CDC40O60508 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 NTN1O95631 604 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 IFNW1P05000 195 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 PRG2P13727 222 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 PRKCAP17252 672 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 HK1P19367 917 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 IDH2P48735 452 aaKnown RBP14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 MAP2K6P52564 334 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 C1orf146Q5VVC0 180 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 VTCN1Q7Z7D3 282 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 OR6T1Q8NGN1 323 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 OR14L1PQ8NHC6 308 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 SLX1AQ9BQ83 275 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 VDAC3Q9Y277 283 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 NTNG1Q9Y2I2 539 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 COL6A6A6NMZ7 2263 aa14.91□□□□□ -0.02
SPTLC2-203ENST00000554901 A0A1B0GVC2 190 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 M0R3H8 397 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 FRS3O43559 492 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 GMFGO60234 142 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 GPIP06744 558 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 GP1BBP13224 206 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 NQO1P15559 274 aaKnown RBP14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 CHMP24386 653 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 ELK4P28324 431 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 SESN3P58005 492 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 SWT1Q5T5J6 900 aaKnown RBP14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 AAGABQ6PD74 315 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 GRINAQ7Z429 371 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 VANGL1Q8TAA9 524 aaPredicted RBP14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 NEIL3Q8TAT5 605 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 DNAJA4Q8WW22 397 aaPredicted RBP14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 GPR137Q96N19 417 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 MCHR1Q99705 422 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 C12orf10Q9HB07 376 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 TMEM27Q9HBJ8 222 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 STOML1Q9UBI4 398 aa14.9□□□□□ -0.02
SPTLC2-203ENST00000554901 PRRC2CQ9Y520 2896 aaKnown RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 TRGV5A0A0B4J1U4 118 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 TCRBV3S1A0A5B6 114 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 NPIPA5E9PKD4 350 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 ACTL6AO96019 429 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 SEMG1P04279 462 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 CELA3AP09093 270 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 ITGA2P17301 1181 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 FKBP2P26885 142 aaKnown RBP14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 IFNA8P32881 189 aa14.89□□□□□ -0.03
SPTLC2-203ENST00000554901 APOBEC1P41238 236 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms