RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 DNAL1Q4LDG9 190 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 KRTCAP3Q53RY4 240 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 WIPI1Q5MNZ9 446 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 DCST1Q5T197 706 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 CBLL1Q75N03 491 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 TSPYL5Q86VY4 417 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ZGRF1Q86YA3 2104 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 LACC1Q8IV20 430 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 GTPBP8Q8N3Z3 284 aaPredicted RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 OR52E4Q8NGH9 312 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 PHF10Q8WUB8 498 aaKnown RBP13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 FIG4Q92562 907 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 AGPAT4Q9NRZ5 378 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF232Q9UNY5 417 aa13.44□□□□□ -0.26
MTHFD1-204ENST00000553405 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 OR2M5A3KFT3 312 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 CFAP73A6NFT4 308 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 EBAG9O00559 213 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 AQP7O14520 342 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 GYG2O15488 501 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 CDC40O60508 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 ATP6V1B2P21281 511 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 HTR2AP28223 471 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 HOXC5Q00444 222 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 CRYZQ08257 329 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 CBFBQ13951 182 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 QPRTQ15274 297 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 LRRC23Q53EV4 343 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 VASNQ6EMK4 673 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 GLYATQ6IB77 296 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 TSEN54Q7Z6J9 526 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 RBM45Q8IUH3 476 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 FAM86B1Q8N7N1 296 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 ST6GALNAC3Q8NDV1 305 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 BHLHE22Q8NFJ8 381 aaPredicted RBP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 TNIP2Q8NFZ5 429 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 OR10Q1Q8NGQ4 319 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 ZBTB8AQ96BR9 441 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 THTPAQ9BU02 230 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 PTGES2Q9H7Z7 377 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 ACER3Q9NUN7 267 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 DCAF13Q9NV06 445 aaKnown RBP13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 VDAC3Q9Y277 283 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF835Q9Y2P0 537 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 SLC6A5Q9Y345 797 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 SNX13Q9Y5W8 968 aa13.43□□□□□ -0.26
MTHFD1-204ENST00000553405 GTF3C1Q12789 2109 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 TRGV5A0A0B4J1U4 118 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 A0A1B0GTH9 108 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 M0R3H8 397 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 TRAPPC6AO75865 159 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 DNAJC8O75937 253 aaPredicted RBP13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 SEMG1P04279 462 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF17P17021 662 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 HK1P19367 917 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 TNFRSF1BP20333 461 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 IL11P20809 199 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 ME2P23368 584 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 SLC6A8P48029 635 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 CLDN15P56746 228 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 SESN3P58005 492 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 SELENOWP63302 87 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 FOXF1Q12946 379 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 BNIP2Q12982 314 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 TRIM25Q14258 630 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 EMC4Q5J8M3 183 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 VTCN1Q7Z7D3 282 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF440Q8IYI8 595 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 TMCO5AQ8N6Q1 288 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 OR6T1Q8NGN1 323 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 OR5M1Q8NGP8 315 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 ST8SIA1Q92185 356 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 UTP4Q969X6 686 aaKnown RBP13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 PRR14Q9BWN1 585 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 UGT2B28Q9BY64 529 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 ADAM19Q9H013 955 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 ACTR3BQ9P1U1 418 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 MAGEL2Q9UJ55 1249 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 DKKL1Q9UK85 242 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 PRDM4Q9UKN5 801 aa13.42□□□□□ -0.26
MTHFD1-204ENST00000553405 HELZ2Q9BYK8 2649 aaKnown RBP13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 CYP7B1O75881 506 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 LYPD3O95274 346 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 SERPINA1P01009 418 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 BMP7P18075 431 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 PGCP20142 388 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 CHMP24386 653 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 ADH6P28332 368 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 RYKP34925 604 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 LHX2P50458 406 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 CCR4P51679 360 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 CLDN18P56856 261 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 IGFBP7Q16270 282 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 IQCCQ4KMZ1 466 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 Q6ZPB1 254 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms