RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MFSD4AQ8N468 514 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 PTPMT1Q8WUK0 201 aaPredicted RBP15.72■□□□□ 0.11
PTPRO-209ENST00000543886 GUCD1Q96NT3 240 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 IFT27Q9BW83 186 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 MEPEQ9NQ76 525 aaPredicted RBP15.72■□□□□ 0.11
PTPRO-209ENST00000543886 STUB1Q9UNE7 303 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 CLCA3PQ9Y6N3 262 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 USP34Q70CQ2 3546 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 FAM86C2PA6NEL3 165 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 EFCAB7A8K855 629 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 BHLHE40O14503 412 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 DSCR3O14972 297 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 POLR1CO15160 346 aaPredicted RBP15.72■□□□□ 0.11
PTPRO-209ENST00000543886 TSPAN19P0C672 248 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 ATP6V1E1P36543 226 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 FXYD6P3P58550 94 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 RGS21Q2M5E4 152 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 PRAMEF17Q5VTA0 474 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 LIPKQ5VXJ0 399 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 MED25Q71SY5 747 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 BTLAQ7Z6A9 289 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 CPOQ8IVL8 374 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 PHC2Q8IXK0 858 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 BBS1Q8NFJ9 593 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 OR4C3Q8NH37 302 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 TSLPQ969D9 159 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 CCDC74AQ96AQ1 378 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 EFHD2Q96C19 240 aaPredicted RBP15.72■□□□□ 0.11
PTPRO-209ENST00000543886 DACH2Q96NX9 599 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 PHOX2BQ99453 314 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 OR8D2Q9GZM6 311 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 ZNF304Q9HCX3 659 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 HINT3Q9NQE9 182 aaKnown RBP15.72■□□□□ 0.11
PTPRO-209ENST00000543886 SEMA5BQ9P283 1151 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 SIGLEC7Q9Y286 467 aa15.72■□□□□ 0.11
PTPRO-209ENST00000543886 TRAV27A0A087WT01 109 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 CPEP16870 476 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 RORAP35398 523 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 BCAP31P51572 246 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 SLC37A1P57057 533 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 SHBQ15464 509 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 NDUFAF6Q330K2 333 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 ARHGAP40Q5TG30 622 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 OR2G6Q5TZ20 316 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 PLBD1Q6P4A8 553 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 KIRREL2Q6UWL6 708 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 LNX2Q8N448 690 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 ZNF527Q8NB42 609 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 SLC46A1Q96NT5 459 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 ZNF426Q9BUY5 554 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 FN3KQ9H479 309 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 SSR3Q9UNL2 185 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 SLC35A3Q9Y2D2 325 aa15.71■□□□□ 0.11
PTPRO-209ENST00000543886 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.11
PTPRO-209ENST00000543886 IGKV3D-11A0A0A0MRZ8 115 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 RFPL3O75679 317 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 HPGDP15428 266 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 S100A5P33763 92 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 COPZ1P61923 177 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 SLC35F1Q5T1Q4 408 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 OAFQ86UD1 273 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 LAPTM4BQ86VI4 370 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 GATAD2AQ86YP4 633 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF440Q8IYI8 595 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 ZNF321PQ8N8H1 164 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 C7orf57Q8NEG2 295 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 OR4F15Q8NGB8 312 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 OR51A7Q8NH64 312 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 GATAD2BQ8WXI9 593 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 DPYSL5Q9BPU6 564 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 CDADC1Q9BWV3 514 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 NXF2Q9GZY0 626 aaKnown RBP15.71■□□□□ 0.1
PTPRO-209ENST00000543886 HOXD1Q9GZZ0 328 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 PRDM6Q9NQX0 595 aa15.71■□□□□ 0.1
PTPRO-209ENST00000543886 NUP210LQ5VU65 1888 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 A0A1B0GX78 115 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 FAM183AA6NL82 134 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 SOCS6O14544 535 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 SULT1C4O75897 302 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 MSL3P1P0C860 447 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 SLC1A3P43003 542 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 CRYBB2P43320 205 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 PPICP45877 212 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 PSMD7P51665 324 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 GPR143P51810 404 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 CRYZQ08257 329 aaKnown RBP15.7■□□□□ 0.1
PTPRO-209ENST00000543886 YOD1Q5VVQ6 348 aaPredicted RBP15.7■□□□□ 0.1
PTPRO-209ENST00000543886 SLITRK4Q8IW52 837 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 NACC2Q96BF6 587 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 ITPKCQ96DU7 683 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 LMF1Q96S06 567 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 NUDT22Q9BRQ3 303 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 ENKD1Q9H0I2 346 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 FGF21Q9NSA1 209 aa15.7■□□□□ 0.1
PTPRO-209ENST00000543886 EXOGQ9Y2C4 368 aaKnown RBP15.7■□□□□ 0.1
PTPRO-209ENST00000543886 COL6A3P12111 3177 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 TMEM221A6NGB7 291 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 WWP2O00308 870 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 GNB5O14775 395 aa15.69■□□□□ 0.1
PTPRO-209ENST00000543886 PRKNO60260 465 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms