RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PEPDP12955 493 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PRKCAP17252 672 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PGCP20142 388 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 POU3F2P20265 443 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PCGF2P35227 344 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 EIF1P41567 113 aaKnown RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PER3P56645 1201 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 CLDN15P56746 228 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PCBP3P57721 371 aaKnown RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 SRYQ05066 204 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 CBFBQ13951 182 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 LARS2Q15031 903 aaKnown RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 QPRTQ15274 297 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ACSF3Q4G176 576 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 C1orf185Q5T7R7 199 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 RNF220Q5VTB9 566 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 C8orf82Q6P1X6 216 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 GRAMD2AQ8IUY3 354 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 EID3Q8N140 333 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 CLIP4Q8N3C7 705 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 CCDC197Q8NCU1 140 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 FBXO27Q8NI29 283 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ZPLD1Q8TCW7 415 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PHF10Q8WUB8 498 aaKnown RBP10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF583Q96ND8 569 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ECSITQ9BQ95 431 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 TUBA1CQ9BQE3 449 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 SPATA9Q9BWV2 254 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 PIF1Q9H611 641 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 EFCAB1Q9HAE3 211 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ARL8BQ9NVJ2 186 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 CMTM6Q9NX76 183 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF232Q9UNY5 417 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 USP22Q9UPT9 525 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 ANGPT4Q9Y264 503 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 AP4B1Q9Y6B7 739 aa10.82□□□□□ -0.68
SSBP3-214ENST00000533209 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 H0Y3Z8 333 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 H0YC42 278 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 H3BML4 177 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 AP3D1O14617 1153 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 EPPINO95925 133 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 GLI4P10075 376 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 IL11P20809 199 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ELK4P28324 431 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ADH6P28332 368 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 AQP1P29972 269 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 RYKP34925 604 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 PTGER4P35408 488 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 SLC6A8P48029 635 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 NUDT2P50583 147 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 SUCLG1P53597 346 aaKnown RBP10.81□□□□□ -0.68
SSBP3-214ENST00000533209 TPD52P55327 224 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-214ENST00000533209 DLX5P56178 289 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 CLDN20P56880 219 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 NUP107P57740 925 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 SESN3P58005 492 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 EPS8Q12929 822 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ZSWIM7Q19AV6 140 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 VMACQ2NL98 169 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF311Q5JNZ3 666 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 TMEM211Q6ICI0 200 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 MTFR2Q6P444 385 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 DHRS4L2Q6PKH6 230 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 RPTNQ6XPR3 784 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 B3GNT6Q6ZMB0 384 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 SEM1Q6ZVN7 128 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ARPINQ7Z6K5 226 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ADGRE4PQ86SQ3 457 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 KRT73Q86Y46 540 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 SLC15A3Q8IY34 581 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF440Q8IYI8 595 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 FITM2Q8N6M3 262 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ST8SIA1Q92185 356 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 MRGPRX4Q96LA9 322 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ZNF607Q96SK3 696 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 HOPXQ9BPY8 73 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-214ENST00000533209 TTYH2Q9BSA4 534 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 CACYBPQ9HB71 228 aaKnown RBP10.81□□□□□ -0.68
SSBP3-214ENST00000533209 ACER3Q9NUN7 267 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 USP9YO00507 2555 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-214ENST00000533209 MYO7BQ6PIF6 2116 aa10.81□□□□□ -0.68
SSBP3-214ENST00000533209 DIDO1Q9BTC0 2240 aaKnown RBP10.8□□□□□ -0.68
SSBP3-214ENST00000533209 CFAP73A6NFT4 308 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 CCT8L1PA6NM43 557 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 FAAHO00519 579 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 SEC14L5O43304 696 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 TPST1O60507 370 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 GKN3PP0CG01 181 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 PRG2P13727 222 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 PRKAR1BP31321 381 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 ACAA2P42765 397 aaKnown RBP10.8□□□□□ -0.68
SSBP3-214ENST00000533209 CPA2P48052 419 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 RAC1P63000 192 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 DMTNQ08495 405 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 PMPCAQ10713 525 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 ART3Q13508 389 aa10.8□□□□□ -0.68
SSBP3-214ENST00000533209 NSUN5P2Q63ZY6 315 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms