RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 VPS35Q96QK1 796 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 KCNS3Q9BQ31 491 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 ROPN1BQ9BZX4 212 aaPredicted RBP4.89□□□□□ -1.63
PCF11-202ENST00000528336 SLC39A8Q9C0K1 460 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 FBXO44Q9H4M3 255 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 GCNT4Q9P109 453 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 PISDQ9UG56 409 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 TBC1D24Q9ULP9 559 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 SELENOKQ9Y6D0 94 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 ZHX2Q9Y6X8 837 aa4.89□□□□□ -1.63
PCF11-202ENST00000528336 AFDNP55196 1824 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 GOLGB1Q14789 3259 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 C12orf71A8MTZ7 269 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 KRTAP16-1A8MUX0 517 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 PRSS46E5RG02 174 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 E9PQ18 207 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ABCD4O14678 606 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 DFNA5O60443 496 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 KRT33AO76009 404 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 GOT2P00505 430 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 GLAP06280 429 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 UBTFL1P0CB47 393 aaPredicted RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 GNSP15586 552 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 RRM2P31350 389 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 DUTP33316 252 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 CCNG1P51959 295 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 DCDC1P59894 354 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 SEC61GP60059 68 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 NUCB2P80303 420 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 CYCSP99999 105 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 SULT2A1Q06520 285 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 TRIP10Q15642 601 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 STX1AQ16623 288 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 AGKQ53H12 422 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 XKR7Q5GH72 579 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 MLIPQ5VWP3 458 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 FAAP20Q6NZ36 180 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 TTC23LQ6PF05 361 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 DOK6Q6PKX4 331 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 TMEM220Q6QAJ8 160 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 GPR142Q7Z601 462 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 CBWD2Q8IUF1 395 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ZNF440Q8IYI8 595 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 TDHQ8IZJ6 230 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 GPC2Q8N158 579 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 THEM5Q8N1Q8 247 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 GIPC3Q8TF64 312 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 PINX1Q96BK5 328 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 NSMCE3Q96MG7 304 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 NEDD4LQ96PU5 975 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ZNF300Q96RE9 604 aaPredicted RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 TGS1Q96RS0 853 aaKnown RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 STRADBQ9C0K7 418 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ZNF160Q9HCG1 818 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 RAB9BQ9NP90 201 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 NUDT4Q9NZJ9 180 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 HACD3Q9P035 362 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ELF5Q9UKW6 265 aaPredicted RBP4.88□□□□□ -1.63
PCF11-202ENST00000528336 PIGLQ9Y2B2 252 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 CBY1Q9Y3M2 126 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ATP6V1DQ9Y5K8 247 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 ZMYM6O95789 1325 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 RTL9Q8NET4 1388 aa4.88□□□□□ -1.63
PCF11-202ENST00000528336 TNRC6CQ9HCJ0 1690 aaKnown RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 KIAA1551Q9HCM1 1747 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 N4BP2Q86UW6 1770 aaPredicted RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 MEX3AA1L020 520 aaKnown RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 MTMR11A4FU01 709 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 F8VVB4 439 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 F8VWA3 439 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 SCO2O43819 266 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 ACSL4O60488 711 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 SYNGR4O95473 234 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CPNE6O95741 557 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CHRNGP07510 517 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CPN1P15169 458 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 UGT1A4P22310 534 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 UQCRC2P22695 453 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 FDFT1P37268 417 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 C21orf59P57076 290 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 ASPHQ12797 758 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 MERTKQ12866 999 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 BTG3Q14201 252 aaPredicted RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 GNA13Q14344 377 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 TAB1Q15750 504 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 USF2Q15853 346 aaPredicted RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 BCL2A1Q16548 175 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 ZSWIM7Q19AV6 140 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 TMEM44Q2T9K0 475 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 SLC25A25Q6KCM7 469 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 FUT10Q6P4F1 479 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 TRMT10CQ7L0Y3 403 aaKnown RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 C16orf62Q7Z3J2 963 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CPEB2Q7Z5Q1 589 aaKnown RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 GPR141Q7Z602 305 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 ITPRIPQ8IWB1 547 aa4.87□□□□□ -1.63
PCF11-202ENST00000528336 GTPBP8Q8N3Z3 284 aaPredicted RBP4.87□□□□□ -1.63
PCF11-202ENST00000528336 NDNFQ8TB73 568 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms