RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ATP6V1C2Q8NEY4 427 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR8J3Q8NGG0 315 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR5M1Q8NGP8 315 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR2V1Q8NHB1 315 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 FBXO27Q8NI29 283 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 NFKBIDQ8NI38 313 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 GPR119Q8TDV5 335 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC26A7Q8TE54 656 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC25A43Q8WUT9 341 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ITLN2Q8WWU7 325 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 WNT2BQ93097 391 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 MAL2Q969L2 176 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 LRRC58Q96CX6 371 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZHX1-C8orf76Q96EF9 292 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ARSGQ96EG1 525 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 KLHL15Q96M94 604 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ANKRD27Q96NW4 1050 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 LRRC37BQ96QE4 947 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 TUBA1CQ9BQE3 449 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 QRSL1Q9H0R6 528 aaKnown RBP4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 TMEM38AQ9H6F2 299 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 TMEM185BQ9H7F4 350 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 EVA1AQ9H8M9 152 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 EFCAB1Q9HAE3 211 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 BCL2L10Q9HD36 194 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 KCNJ16Q9NPI9 418 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ACER3Q9NUN7 267 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC25A37Q9NYZ2 338 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 SELENONQ9NZV5 590 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLAMF8Q9P0V8 285 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 RPS6KB2Q9UBS0 482 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 PLEKHB1Q9UF11 243 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRDM4Q9UKN5 801 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ICAM5Q9UMF0 924 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ARL2BPQ9Y2Y0 163 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF337Q9Y3M9 751 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF175Q9Y473 711 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM215AQ9Y5M1 114 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 HRH3Q9Y5N1 445 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 KLF2Q9Y5W3 355 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 GMEB1Q9Y692 573 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 DSPPQ9NZW4 1301 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 SHANK1Q9Y566 2161 aa4.88□□□□□ -1.63
HMGB1P40-201ENST00000525121 TRBV5-3A0A0A0MS03 114 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CENPVL1A0A0U1RR11 272 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CDHR4A6H8M9 788 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MBD3L4A6NDZ8 208 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MBD3L3A6NE82 208 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MBD3L5A6NJ08 208 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SHISA8B8ZZ34 492 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 EEF1E1-BLOC1S5C9J1V9 151 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 FBP2O00757 339 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 TNFSF11O14788 317 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 AIM2O14862 343 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 GSTA4O15217 222 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 EEF1E1O43324 174 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 OIP5O43482 229 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 GMNNO75496 209 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 C1QCP02747 245 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CRHP06850 196 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 NUDT7P0C024 238 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 TFPIP10646 304 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 COX4I1P13073 169 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 COX6B1P14854 86 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRKCAP17252 672 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 HOXB9P17482 250 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 BMP5P22003 454 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CTSSP25774 331 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 HTR1EP28566 365 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 AQP1P29972 269 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRDX6P30041 224 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRKAR1BP31321 381 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PCGF2P35227 344 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SFTPDP35247 375 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 OPRM1P35372 400 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PGM1P36871 562 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PEX19P40855 299 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CPA2P48052 419 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 IDH2P48735 452 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 NUDT2P50583 147 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MNAT1P51948 309 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 POLR2HP52434 150 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MAP2K6P52564 334 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CTBP2P56545 445 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLDN15P56746 228 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLDN18P56856 261 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLDN20P56880 219 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CARD18P57730 90 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RGS8P57771 180 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SESN3P58005 492 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CSNK2A1P68400 391 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MXRA7P84157 204 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SRSF1Q07955 248 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PON3Q15166 354 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MAPK14Q16539 360 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 TMEM44Q2T9K0 475 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC25A53Q5H9E4 307 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 AP1ARQ63HQ0 302 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 GTF2IRD2BQ6EKJ0 949 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms