RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 OR7A5Q15622 319 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 NIPAL3Q6P499 406 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 B3GNT9Q6UX72 402 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 MRPL21Q7Z2W9 205 aaKnown RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 DNAJC5GQ8N7S2 189 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 NLGN4YQ8NFZ3 816 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 OR4F15Q8NGB8 312 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ASB11Q8WXH4 323 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 LRRC46Q96FV0 321 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 MACROD1Q9BQ69 325 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ARHGAP9Q9BRR9 750 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 VDAC3Q9Y277 283 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ATG4BQ9Y4P1 393 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 C7orf72A4D263 438 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 FAM227AF5H4B4 570 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 SDC3O75056 442 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 SLC34A2O95436 690 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 AOAHP28039 575 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 GABRB3P28472 473 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CX3CR1P49238 355 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 NTHL1P78549 312 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ACY1Q03154 408 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
NEK1-206ENST00000510533 SPRED1Q7Z699 444 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ARRDC2Q8TBH0 407 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ZNF480Q8WV37 535 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 UHRF1Q96T88 793 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 RTP3Q9BQQ7 232 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 MKRN2Q9H000 416 aaKnown RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 PPA2Q9H2U2 334 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 RICTORQ6R327 1708 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CD300LBA8K4G0 201 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 J3KTA2 159 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 P2RX6O15547 441 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 UBBP0CG47 229 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 UBCP0CG48 685 aaKnown RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 RPS2P15880 293 aaKnown RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 PRKACAP17612 351 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 HLA-DMAP28067 261 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 SSTR2P30874 369 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 P2RY2P41231 377 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CSNK1DP48730 415 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 OR1Q1Q15612 314 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 C14orf28Q4W4Y0 310 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 LIPIQ6XZB0 460 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CPXM2Q8N436 756 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 HORMAD2Q8N7B1 307 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 PAQR8Q8TEZ7 354 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 ZNF681Q96N22 645 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 NICN1Q9BSH3 213 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 OR10A5Q9H207 317 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 OR10A2Q9H208 303 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 TESQ9UGI8 421 aaKnown RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CICQ96RK0 1608 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 MBLAC1A4D2B0 266 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 C1orf105O95561 183 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 RAB40ALP0C0E4 278 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 LIPCP11150 499 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 HIST1H1TP22492 207 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 PTGER1P34995 402 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 GIPRP48546 466 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CDK3Q00526 305 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 PEA15Q15121 130 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 SYPL1Q16563 259 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 PGM2L1Q6PCE3 622 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 TMEM184AQ6ZMB5 413 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 DPY19L4Q7Z388 723 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 SLC35F3Q8IY50 421 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 OR9A4Q8NGU2 314 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 RAB40AQ8WXH6 277 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 FRZBQ92765 325 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 RADILQ96JH8 1075 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 CPPED1Q9BRF8 314 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 PAPOLGQ9BWT3 736 aaKnown RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 C20orf27Q9GZN8 174 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 C19orf12Q9NSK7 152 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 SPATA6Q9NWH7 488 aaPredicted RBP9.93□□□□□ -0.82
NEK1-206ENST00000510533 NALCNQ8IZF0 1738 aa9.93□□□□□ -0.82
NEK1-206ENST00000510533 HHLA1C9JL84 531 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 NUDT21O43809 227 aaKnown RBP9.92□□□□□ -0.82
NEK1-206ENST00000510533 ARAFP10398 606 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 RAB6AP20340 208 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 GABRR1P24046 479 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 EIF2DP41214 584 aaKnown RBP9.92□□□□□ -0.82
NEK1-206ENST00000510533 RPS5P46782 204 aaKnown RBP9.92□□□□□ -0.82
NEK1-206ENST00000510533 HBA1P69905 142 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 LTBQ06643 244 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 ZNF169Q14929 603 aaPredicted RBP9.92□□□□□ -0.82
NEK1-206ENST00000510533 IRF4Q15306 451 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 CNN3Q15417 329 aaKnown RBP9.92□□□□□ -0.82
NEK1-206ENST00000510533 DUSP7Q16829 419 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 SLC5A12Q1EHB4 618 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 UBE2NLQ5JXB2 153 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 SULF2Q8IWU5 870 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 LRRC56Q8IYG6 542 aaPredicted RBP9.92□□□□□ -0.82
NEK1-206ENST00000510533 PRR18Q8N4B5 295 aa9.92□□□□□ -0.82
NEK1-206ENST00000510533 SIMC1Q8NDZ2 872 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms