RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 MBD3L5A6NJ08 208 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 HSPB2A8KAH6 182 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 H0YC42 278 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 TOXO94900 526 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 LINGO3P0C6S8 592 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 PPIBP23284 216 aaKnown RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 ME2P23368 584 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 EIF1P41567 113 aaKnown RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 SUCLG1P53597 346 aaKnown RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 IST1P53990 364 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 CRISP3P54108 245 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 TPD52P55327 224 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 CLDN20P56880 219 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 EEFSECP57772 596 aaKnown RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 FADDQ13158 208 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 SKP2Q13309 424 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 RGNQ15493 299 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 TOMM34Q15785 309 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 HSPB2Q16082 182 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 BCL2A1Q16548 175 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 RPS26P11Q5JNZ5 115 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 PPP4R4Q6NUP7 873 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 C9orf106Q8NAJ2 232 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 NAXEQ8NCW5 288 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 OR5W2Q8NH69 310 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 FBXO27Q8NI29 283 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 GPR119Q8TDV5 335 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 WDR60Q8WVS4 1066 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 C10orf82Q8WW14 230 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 ZG16BQ96DA0 208 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 ARSGQ96EG1 525 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 TMEM19Q96HH6 336 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF317Q96PQ6 595 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 LAT2Q9GZY6 243 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 TMEM185BQ9H7F4 350 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 NPDC1Q9NQX5 325 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 THUMPD1Q9NXG2 353 aaKnown RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 NDUFAF1Q9Y375 327 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-209ENST00000506630 AP4B1Q9Y6B7 739 aa11.81□□□□□ -0.52
TCOF1-209ENST00000506630 CLDN24A6NM45 220 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 EVPLLA8MZ36 301 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 DYNC1I1O14576 645 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 EIF1AYO14602 144 aaKnown RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 OPN1LWP04000 364 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 NUDT7P0C024 238 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 TMIGD3P0DMS9 266 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 IL7RP16871 459 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 KLK2P20151 261 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 BMP5P22003 454 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 CEACAM8P31997 349 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 PGM1P36871 562 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 CLDN15P56746 228 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 RPS3AP61247 264 aaKnown RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 KCNJ10P78508 379 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 MYBPHQ13203 477 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 GNA13Q14344 377 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 QPRTQ15274 297 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 MAPK11Q15759 364 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 ADGRE4PQ86SQ3 457 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 LIX1LQ8IVB5 337 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 DMRTC2Q8IXT2 367 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 PEX5LQ8IYB4 626 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 SLC38A5Q8WUX1 472 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 FOXC2Q99958 501 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 THUMPD3Q9BV44 507 aaKnown RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 PINK1Q9BXM7 581 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 CACYBPQ9HB71 228 aaKnown RBP11.8□□□□□ -0.52
TCOF1-209ENST00000506630 MRGBPQ9NV56 204 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 CLCF1Q9UBD9 225 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 CORO2BQ9UQ03 480 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 SPG11Q96JI7 2443 aa11.8□□□□□ -0.52
TCOF1-209ENST00000506630 TRBV5-3A0A0A0MS03 114 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 AGAP5A6NIR3 686 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 SLC22A20A6NK97 555 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 C5orf58C9J3I9 102 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 DVL2O14641 736 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 BCAS1O75363 584 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 DBIP07108 87 aaKnown RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 TFPTP0C1Z6 253 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 PRKCAP17252 672 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 PGCP20142 388 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 IL11P20809 199 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 RPS4Y1P22090 263 aaKnown RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 PSMA4P25789 261 aaKnown RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 ELK4P28324 431 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 SFTPDP35247 375 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 EIF1AXP47813 144 aaKnown RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 AGFG1P52594 562 aaKnown RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF136P52737 540 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 RAC1P63000 192 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 NFYCQ13952 458 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 SGCBQ16585 318 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 SLC25A35Q3KQZ1 300 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms