RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CALHM2Q9HA72 323 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 DNAJB12Q9NXW2 375 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 COQ3Q9NZJ6 369 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CALML5Q9NZT1 146 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CRYBG3Q68DQ2 2970 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 DOCK7Q96N67 2140 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 DBIP07108 87 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 NID1P14543 1247 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 ADSLP30566 484 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 TIMP3P35625 211 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 TRMT5Q32P41 509 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 SLC25A53Q5H9E4 307 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 MRPL2Q5T653 305 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 ZNF836Q6ZNA1 936 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 LIX1LQ8IVB5 337 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 CMIPQ8IY22 773 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 MEIOBQ8N635 442 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 NFKBIDQ8NI38 313 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 ASB5Q8WWX0 329 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 ADGRG7Q96K78 797 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 UCN2Q96RP3 112 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 SLC39A3Q9BRY0 314 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 RSPO3Q9BXY4 272 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 TMEM185BQ9H7F4 350 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 BCL2L10Q9HD36 194 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 EXOSC3Q9NQT5 275 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 CORO2BQ9UQ03 480 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 CHST2Q9Y4C5 530 aa16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 KLF2Q9Y5W3 355 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 GPC6Q9Y625 555 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-216ENST00000506537 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 A0A0G2JPF8 293 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 GMNCA6NCL1 334 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 TMEM247A6NEH6 219 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 EVPLLA8MZ36 301 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 HNRNPCL2B2RXH8 293 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 HNRNPCL3B7ZW38 293 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 SLC22A2O15244 555 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 SNX3O60493 162 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 HNRNPCL1O60812 293 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 OPN1LWP04000 364 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 HNRNPCL4P0DMR1 293 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 IL7RP16871 459 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 ELK4P28324 431 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 SHC1P29353 583 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 EIF1P41567 113 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 EEF1A1P68104 462 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 SF3B4Q15427 424 aaKnown RBP eCLIP16.42■□□□□ 0.225e-9■■■□□ 15
PDLIM7-216ENST00000506537 CTU2Q2VPK5 515 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 COQ5Q5HYK3 327 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 PRAMEF8Q5VWM4 474 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 PRAMEF7Q5VXH5 474 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 LSRQ86X29 649 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 PTOV1Q86YD1 416 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 PEX5LQ8IYB4 626 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 METTL25Q8N6Q8 603 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 OR52P1PQ8NH57 321 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 LILRB4Q8NHJ6 448 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 BBS10Q8TAM1 723 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 CA5BP1Q8WTZ4 195 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 ZNF845Q96IR2 970 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 MRGPRX4Q96LA9 322 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 TMEM38AQ9H6F2 299 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 RLIMQ9NVW2 624 aa16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 ZNF443Q9Y2A4 671 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-216ENST00000506537 LOC100653049A0A140TA62 436 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 BBIP1A8MTZ0 92 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 PRSS44E7EML9 344 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 C19orf84I3L1E1 186 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 AP3D1O14617 1153 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 MRASO14807 208 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 KRT34O76011 436 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 PGM3O95394 542 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 TGM6O95932 706 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 PGCP20142 388 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 ADH6P28332 368 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 HTR1EP28566 365 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 RYKP34925 604 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 ZNF136P52737 540 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 DLX5P56178 289 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 RAC1P63000 192 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 CDK6Q00534 326 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 GNA13Q14344 377 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 MAPRE2Q15555 327 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 LIN52Q52LA3 116 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 POMZP3Q6PJE2 187 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 MTDHQ86UE4 582 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 TREML1Q86YW5 311 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 POU5F2Q8N7G0 328 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 ST8SIA1Q92185 356 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 CCDC106Q9BWC9 280 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 NSRP1Q9H0G5 558 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 FAM53CQ9NYF3 392 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 CELSR2Q9HCU4 2923 aa16.41■□□□□ 0.22
PDLIM7-216ENST00000506537 UNC79Q9P2D8 2635 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 A0A0J9YW62 118 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 CDHR4A6H8M9 788 aa16.4■□□□□ 0.22
PDLIM7-216ENST00000506537 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms