RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 EID3Q8N140 333 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 RLIMQ9NVW2 624 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 CMTM6Q9NX76 183 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 ZNF232Q9UNY5 417 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 ANGPT4Q9Y264 503 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 FAM215AQ9Y5M1 114 aa22.69■■□□□ 1.22
LSM6-202ENST00000502781 AHRRA9YTQ3 701 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 FAM47E-STBD1D6RA91 191 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 LDLRP01130 860 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 PEPDP12955 493 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 PGCP20142 388 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 PCGF2P35227 344 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 PTGER4P35408 488 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 NUDT2P50583 147 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 CCR4P51679 360 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 QPRTQ15274 297 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 ZNF311Q5JNZ3 666 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 ZNF585AQ6P3V2 769 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 CLIP4Q8N3C7 705 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 BCAS4Q8TDM0 211 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 PHF10Q8WUB8 498 aaKnown RBP22.68■■□□□ 1.22
LSM6-202ENST00000502781 REXO5Q96IC2 774 aaKnown RBP22.68■■□□□ 1.22
LSM6-202ENST00000502781 MRGPRX4Q96LA9 322 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 ARL8BQ9NVJ2 186 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 TAGLN3Q9UI15 199 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 AP3M1Q9Y2T2 418 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 DOPEY1Q5JWR5 2465 aa22.68■■□□□ 1.22
LSM6-202ENST00000502781 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 FAAHO00519 579 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 NDUFAB1O14561 156 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 PRKAR1BP31321 381 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 FOXF1Q12946 379 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 ART3Q13508 389 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 MTFR2Q6P444 385 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 DHRS4L2Q6PKH6 230 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 ADGRE4PQ86SQ3 457 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 KRT73Q86Y46 540 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 ZNF440Q8IYI8 595 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 RPRMLQ8N4K4 120 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 MARVELD2Q8N4S9 558 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 ST8SIA1Q92185 356 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 CCDC120Q96HB5 630 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 RNF145Q96MT1 663 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 ZNF607Q96SK3 696 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 PRDM4Q9UKN5 801 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 AP4B1Q9Y6B7 739 aa22.67■■□□□ 1.22
LSM6-202ENST00000502781 AGFG2O95081 481 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 POU3F2P20265 443 aaPredicted RBP22.66■■□□□ 1.22
LSM6-202ENST00000502781 ELK4P28324 431 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 SLC6A8P48029 635 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 CLDN15P56746 228 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 KRT72Q14CN4 511 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 FBXO27Q8NI29 283 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 ZPLD1Q8TCW7 415 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 SLC35B4Q969S0 331 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 SPATA5L1Q9BVQ7 753 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 PIF1Q9H611 641 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 CACYBPQ9HB71 228 aaKnown RBP22.66■■□□□ 1.22
LSM6-202ENST00000502781 CAMK2AQ9UQM7 478 aa22.66■■□□□ 1.22
LSM6-202ENST00000502781 H3BML4 177 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 EFNA2O43921 213 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 MFN2O95140 757 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 AQP1P29972 269 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 PER3P56645 1201 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 SESN3P58005 492 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 RAC1P63000 192 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 EPS8Q12929 822 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 VEZF1Q14119 521 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 ACSF3Q4G176 576 aaPredicted RBP22.65■■□□□ 1.22
LSM6-202ENST00000502781 C1orf185Q5T7R7 199 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 ERICH5Q6P6B1 374 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 CCDC80Q76M96 950 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 ARMC7Q9H6L4 198 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 ACER3Q9NUN7 267 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 ABCD2Q9UBJ2 740 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 USP22Q9UPT9 525 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 PCNX1Q96RV3 2341 aa22.65■■□□□ 1.22
LSM6-202ENST00000502781 CFAP73A6NFT4 308 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 CCT8L1PA6NM43 557 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 FAM220BPB1ANY3 271 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 NME4O00746 187 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 AP3D1O14617 1153 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 SERPINB7O75635 380 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 EPPINO95925 133 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 RNF224P0DH78 156 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 ESRRAP11474 423 aaPredicted RBP22.64■■□□□ 1.22
LSM6-202ENST00000502781 RYKP34925 604 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 ACAA2P42765 397 aaKnown RBP22.64■■□□□ 1.22
LSM6-202ENST00000502781 CPA2P48052 419 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 SLC7A2P52569 658 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 ADORA2A-AS1P86434 159 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 DMTNQ08495 405 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 SF3B4Q15427 424 aaKnown RBP eCLIP22.64■■□□□ 1.22
LSM6-202ENST00000502781 INTS11Q5TA45 600 aaKnown RBP22.64■■□□□ 1.22
LSM6-202ENST00000502781 B3GNT6Q6ZMB0 384 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 NCCRP1Q6ZVX7 275 aaPredicted RBP22.64■■□□□ 1.22
LSM6-202ENST00000502781 PATL1Q86TB9 770 aaKnown RBP22.64■■□□□ 1.22
LSM6-202ENST00000502781 TMEM234Q8WY98 164 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 TTYH2Q9BSA4 534 aa22.64■■□□□ 1.22
LSM6-202ENST00000502781 ALKBH4Q9NXW9 302 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms