RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 CDK6Q00534 326 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 GNA13Q14344 377 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 SF3B4Q15427 424 aaKnown RBP eCLIP8.86□□□□□ -0.99
CALD1-223ENST00000496024 SGCBQ16585 318 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 TMEM44Q2T9K0 475 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 TRMT5Q32P41 509 aaKnown RBP8.86□□□□□ -0.99
CALD1-223ENST00000496024 MRPL2Q5T653 305 aaKnown RBP8.86□□□□□ -0.99
CALD1-223ENST00000496024 NSUN5P2Q63ZY6 315 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 P4HA3Q7Z4N8 544 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 LSRQ86X29 649 aaPredicted RBP8.86□□□□□ -0.99
CALD1-223ENST00000496024 GRAMD2AQ8IUY3 354 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 LACC1Q8IV20 430 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 TNIP2Q8NFZ5 429 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 OR52P1PQ8NH57 321 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 ZNF563Q8TA94 476 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 ZPLD1Q8TCW7 415 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 CA5BP1Q8WTZ4 195 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 ASB5Q8WWX0 329 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 ZNF845Q96IR2 970 aaPredicted RBP8.86□□□□□ -0.99
CALD1-223ENST00000496024 ANKRD27Q96NW4 1050 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 PINK1Q9BXM7 581 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 UCK2Q9BZX2 261 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 A4GALTQ9NPC4 353 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 STOML1Q9UBI4 398 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 Q9UFV3 132 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 ZNF232Q9UNY5 417 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 CORO2BQ9UQ03 480 aa8.86□□□□□ -0.99
CALD1-223ENST00000496024 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 NKX2-6A6NCS4 301 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 LINC01387J3KSC0 135 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 AP3D1O14617 1153 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 TNFSF11O14788 317 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 EFNA2O43921 213 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 SNX3O60493 162 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 TOXO94900 526 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 PGM3O95394 542 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 IL2RAP01589 272 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 GKN3PP0CG01 181 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 BMP2P12643 396 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 COX4I1P13073 169 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 GP1BBP13224 206 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 NID1P14543 1247 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 PRKCAP17252 672 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 RPS4Y1P22090 263 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 SLC6A2P23975 617 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 PSMA4P25789 261 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 HTR1EP28566 365 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 GRNP28799 593 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 SHC1P29353 583 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 ADSLP30566 484 aaPredicted RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 CHRNB4P30926 498 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 EIF1P41567 113 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 EIF1AXP47813 144 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 EEFSECP57772 596 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 SESN3P58005 492 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 RPS3AP61247 264 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 PLAURQ03405 335 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 MERTKQ12866 999 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 SCARB2Q14108 478 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 LARS2Q15031 903 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 BCL2A1Q16548 175 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 LIN52Q52LA3 116 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 RABL3Q5HYI8 236 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 ZNF311Q5JNZ3 666 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 RIPPLY2Q5TAB7 128 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 REEP3Q6NUK4 255 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 ZNF836Q6ZNA1 936 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 TREML1Q86YW5 311 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 LIX1LQ8IVB5 337 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 GCNT2Q8N0V5 402 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 LILRA2Q8N149 483 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 CLIP4Q8N3C7 705 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 C9orf106Q8NAJ2 232 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 PCYOX1LQ8NBM8 494 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 OR10A6Q8NH74 314 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 BBS10Q8TAM1 723 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 LRRC58Q96CX6 371 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 RCN3Q96D15 328 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 DNAJA3Q96EY1 480 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 CCDC106Q9BWC9 280 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 CALHM2Q9HA72 323 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 ACER3Q9NUN7 267 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 DNAJB12Q9NXW2 375 aaKnown RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 ZNF443Q9Y2A4 671 aaPredicted RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 GPC6Q9Y625 555 aaPredicted RBP8.85□□□□□ -0.99
CALD1-223ENST00000496024 AP4B1Q9Y6B7 739 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 MPDZO75970 2070 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 CRYBG3Q68DQ2 2970 aa8.85□□□□□ -0.99
CALD1-223ENST00000496024 DSPPQ9NZW4 1301 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 A0A0J9YW62 118 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 C7orf72A4D263 438 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 CDHR4A6H8M9 788 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 CFAP73A6NFT4 308 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 CD8B2A6NJW9 211 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 SLC22A20A6NK97 555 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 HSPB2A8KAH6 182 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 BBIP1A8MTZ0 92 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 FXYD1O00168 92 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 AIM2O14862 343 aa8.84□□□□□ -0.99
CALD1-223ENST00000496024 FRS3O43559 492 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms