RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 MTTPP55157 894 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 PLOD1Q02809 727 aaPredicted RBP4.29□□□□□ -1.72
SMG7-208ENST00000493609 CAMK4Q16566 473 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 SLC22A10Q63ZE4 541 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 UNC5DQ6UXZ4 953 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 GPATCH11Q8N954 259 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 ADAMTS16Q8TE57 1224 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 GIPC3Q8TF64 312 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 VSIG2Q96IQ7 327 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 PAXXQ9BUH6 204 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 GPN2Q9H9Y4 310 aaPredicted RBP4.29□□□□□ -1.72
SMG7-208ENST00000493609 UTP6Q9NYH9 597 aaKnown RBP4.29□□□□□ -1.72
SMG7-208ENST00000493609 ACTR3BQ9P1U1 418 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 ATXN10Q9UBB4 475 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 MGAT4BQ9UQ53 548 aa4.29□□□□□ -1.72
SMG7-208ENST00000493609 SLX4Q8IY92 1834 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 A0A1B0GUL7 405 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 WASH3PC4AMC7 463 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 BBOX1O75936 387 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 CYLC1P35663 651 aaPredicted RBP4.28□□□□□ -1.72
SMG7-208ENST00000493609 CD47Q08722 323 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 TMEM52BQ4KMG9 183 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 CYBRD1Q53TN4 286 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 CASC1Q6TDU7 716 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 WASH2PQ6VEQ5 465 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 MISPQ8IVT2 679 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 C11orf53Q8IXP5 236 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 EFCAB13Q8IY85 973 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 GPR65Q8IYL9 337 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 C11orf42Q8N5U0 333 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 ZNF525Q8N782 197 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 ANKRD20A12PQ8NF67 263 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 ATP6V1HQ9UI12 483 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 COL1A1P02452 1464 aaPredicted RBP4.28□□□□□ -1.72
SMG7-208ENST00000493609 NAV1Q8NEY1 1877 aa4.28□□□□□ -1.72
SMG7-208ENST00000493609 KLF18A0A0U1RQI7 1052 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 ZSCAN5BA6NJL1 495 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 LRRC30A6NM36 301 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 WASHC1A8K0Z3 465 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 FAM220BPB1ANY3 271 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 NUDT21O43809 227 aaKnown RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 VPS26AO75436 327 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 IGHV1-2P23083 117 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 CCND2P30279 289 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 KRTAP10-3P60369 221 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 RPS8P62241 208 aaKnown RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 FKBP1AP62942 108 aaKnown RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 IGLV3-21P80748 117 aaPredicted RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 HSF2Q03933 536 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 CYP51A1Q16850 503 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 GLYR1Q49A26 553 aaPredicted RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 PRR30Q53SZ7 412 aaPredicted RBP4.27□□□□□ -1.73
SMG7-208ENST00000493609 CYS1Q717R9 158 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 UPRTQ96BW1 309 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 VSTM2LQ96N03 204 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 TMEM121Q9BTD3 319 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 TSSK1BQ9BXA7 367 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 DPM3Q9P2X0 92 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 CLEC4EQ9ULY5 219 aa4.27□□□□□ -1.73
SMG7-208ENST00000493609 SCN9AQ15858 1988 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 LANCL1O43813 399 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 RAMP1O60894 148 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 SCGB2A1O75556 95 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 H2AFZP0C0S5 128 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 XRCC1P18887 633 aaPredicted RBP4.26□□□□□ -1.73
SMG7-208ENST00000493609 CHMLP26374 656 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 CDH5P33151 784 aaPredicted RBP4.26□□□□□ -1.73
SMG7-208ENST00000493609 RPL4P36578 427 aaKnown RBP4.26□□□□□ -1.73
SMG7-208ENST00000493609 PTGFRP43088 359 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 EMDP50402 254 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 INAQ16352 499 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 C12orf60Q5U649 245 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 ZSCAN25Q6NSZ9 544 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 STAC2Q6ZMT1 411 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 LHFPL4Q7Z7J7 247 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 C9orf40Q8IXQ3 194 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 BPIFB2Q8N4F0 458 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 CSNK1A1LQ8N752 337 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 PINX1Q96BK5 328 aaKnown RBP4.26□□□□□ -1.73
SMG7-208ENST00000493609 TBCDQ9BTW9 1192 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 NFKBIZQ9BYH8 718 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 CCSER1Q9C0I3 900 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 COMMD4Q9H0A8 199 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 SLC25A51Q9H1U9 297 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 ECT2Q9H8V3 914 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 LPAR2Q9HBW0 351 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 RBM28Q9NW13 759 aaKnown RBP4.26□□□□□ -1.73
SMG7-208ENST00000493609 MOKQ9UQ07 419 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 ATP6V0A2Q9Y487 856 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 CROCCQ5TZA2 2017 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 ROBO3Q96MS0 1386 aa4.26□□□□□ -1.73
SMG7-208ENST00000493609 ZNF318Q5VUA4 2279 aa4.25□□□□□ -1.73
SMG7-208ENST00000493609 WDR19Q8NEZ3 1342 aa4.25□□□□□ -1.73
SMG7-208ENST00000493609 MYH2Q9UKX2 1941 aa4.25□□□□□ -1.73
SMG7-208ENST00000493609 LATO43561 262 aa4.25□□□□□ -1.73
SMG7-208ENST00000493609 UQCRBP14927 111 aa4.25□□□□□ -1.73
SMG7-208ENST00000493609 ADRA1AP35348 466 aa4.25□□□□□ -1.73
SMG7-208ENST00000493609 NOVA1P51513 510 aaKnown RBP4.25□□□□□ -1.73
SMG7-208ENST00000493609 DPYSQ14117 519 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms