RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CTAGE4Q8IX94 777 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 KLHL7Q8IXQ5 586 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 ANKS4BQ8N8V4 417 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 CDRT4Q8N9R6 151 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 ZNF527Q8NB42 609 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 C1orf162Q8NEQ5 155 aaPredicted RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 ATP6V1C2Q8NEY4 427 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 OR6Y1Q8NGX8 325 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 CDC26Q8NHZ8 85 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 FBXO27Q8NI29 283 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 C16orf78Q8WTQ4 265 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 NEU4Q8WWR8 484 aaPredicted RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 ELP4Q96EB1 424 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 ZHX1-C8orf76Q96EF9 292 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 MRGPRX4Q96LA9 322 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 ZNF300Q96RE9 604 aaPredicted RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 SNX18Q96RF0 628 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 UBQLN4Q9NRR5 601 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 MALT1Q9UDY8 824 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 DMGDHQ9UI17 866 aaKnown RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 USP22Q9UPT9 525 aa6.7□□□□□ -1.34
PDPN-205ENST00000487038 NOSIPQ9Y314 301 aaKnown RBP6.7□□□□□ -1.34
PDPN-205ENST00000487038 A0A096LPK6 155 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 A0A1W2PNR3 127 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 GXYLT2A0PJZ3 443 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 CCDC151A5D8V7 595 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 GPR171O14626 319 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 TMPRSS2O15393 492 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 NKX2-2O95096 273 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 STAMBPO95630 424 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 IGKV1D-16P01601 117 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 IGHV3-9P01782 118 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 RPS17P08708 135 aaKnown RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 RBP1P09455 135 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ANXA4P09525 319 aaPredicted RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 DAOP14920 347 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 PAX7P23759 505 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 HMOX2P30519 316 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 IL2RGP31785 369 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 GPC1P35052 558 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 SERPINF1P36955 418 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 IDH3GP51553 393 aaPredicted RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 TGFBR3Q03167 851 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ZNF117Q03924 483 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 C2orf80Q0P641 193 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 FOXL1Q12952 345 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 RASA2Q15283 850 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 GABRA6Q16445 453 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ZSWIM7Q19AV6 140 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 TSNAXIP1Q2TAA8 658 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 MIDNQ504T8 468 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 LETMD1Q6P1Q0 360 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 TREML4Q6UXN2 200 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 SPATA19Q7Z5L4 167 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 PLD6Q8N2A8 252 aaKnown RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 COX18Q8N8Q8 333 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 OR4C3Q8NH37 302 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 CEP70Q8NHQ1 597 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 PHOSPHO1Q8TCT1 267 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 WDR60Q8WVS4 1066 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 MRPL24Q96A35 216 aaKnown RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 MUS81Q96NY9 551 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 MS4A4EQ96PG1 132 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ZNF747Q9BV97 191 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 SUCNR1Q9BXA5 334 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 EBPLQ9BY08 206 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 GLIPR2Q9H4G4 154 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 DCTN4Q9UJW0 460 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ING1Q9UK53 422 aaPredicted RBP6.69□□□□□ -1.34
PDPN-205ENST00000487038 SNX12Q9UMY4 172 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 PPP2R2CQ9Y2T4 447 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ZNF281Q9Y2X9 895 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 ACTL7BQ9Y614 415 aa6.69□□□□□ -1.34
PDPN-205ENST00000487038 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 C9JVG2 144 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 LILRA1O75019 489 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 ULK1O75385 1050 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 MRPL33O75394 65 aaKnown RBP6.68□□□□□ -1.34
PDPN-205ENST00000487038 RGS9O75916 674 aaPredicted RBP6.68□□□□□ -1.34
PDPN-205ENST00000487038 OR4F21O95013 312 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 KCNK2O95069 426 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 CRYAAP02489 173 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 IFNGR1P15260 489 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 PRKCAP17252 672 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 TCP1P17987 556 aaKnown RBP6.68□□□□□ -1.34
PDPN-205ENST00000487038 ATP6V1C1P21283 382 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 EPHA1P21709 976 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 EDNRAP25101 427 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 SLC1A3P43003 542 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 ARFIP2P53365 341 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 PRPS1P60891 318 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 RAE1P78406 368 aaKnown RBP6.68□□□□□ -1.34
PDPN-205ENST00000487038 HSPB3Q12988 150 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 CBFBQ13951 182 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 CCNIQ14094 377 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 PDK3Q15120 406 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 CD226Q15762 336 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 EFNB3Q15768 340 aa6.68□□□□□ -1.34
PDPN-205ENST00000487038 MROH9Q5TGP6 573 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms