RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MFSD4AQ8N468 514 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 OR13C2Q8NGS9 318 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 NXF2Q9GZY0 626 aaKnown RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 HOXD1Q9GZZ0 328 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 ZNF304Q9HCX3 659 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 ISYNA1Q9NPH2 558 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 H2AFY2Q9P0M6 372 aaPredicted RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 STUB1Q9UNE7 303 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 CARD8Q9Y2G2 431 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 A8MU76 341 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 GPX5O75715 221 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 ATXN8OSP0DMR3 200 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 BMP4P12644 408 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 MYF5P13349 255 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 RORAP35398 523 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 PPICP45877 212 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 RPS3AP61247 264 aaKnown RBP18.74■□□□□ 0.59
HPS3-206ENST00000486530 CXXC5Q7LFL8 322 aaKnown RBP18.74■□□□□ 0.59
HPS3-206ENST00000486530 ZNF440Q8IYI8 595 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 SLC43A2Q8N370 569 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 ZSCAN1Q8NBB4 408 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 TSLPQ969D9 159 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 CCDC74AQ96AQ1 378 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 DUSP23Q9BVJ7 150 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 HINT3Q9NQE9 182 aaKnown RBP18.74■□□□□ 0.59
HPS3-206ENST00000486530 RP1P56715 2156 aa18.74■□□□□ 0.59
HPS3-206ENST00000486530 A0A1B0GX78 115 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 APOL3O95236 402 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 SLC2A10O95528 541 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 CPEP16870 476 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 EPHA8P29322 1005 aaPredicted RBP18.73■□□□□ 0.59
HPS3-206ENST00000486530 ELAVL1Q15717 326 aaKnown RBP18.73■□□□□ 0.59
HPS3-206ENST00000486530 KIRREL2Q6UWL6 708 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 LINC00114Q6XXX2 140 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 SLITRK4Q8IW52 837 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 PHC2Q8IXK0 858 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 CADM2Q8N3J6 435 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 ZNF527Q8NB42 609 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 OR4C3Q8NH37 302 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 EXOGQ9Y2C4 368 aaKnown RBP18.73■□□□□ 0.59
HPS3-206ENST00000486530 CLCA3PQ9Y6N3 262 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 TECTAO75443 2155 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 FAM86C2PA6NEL3 165 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 TOX3O15405 576 aaPredicted RBP18.73■□□□□ 0.59
HPS3-206ENST00000486530 RFPL3O75679 317 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 SOX6P35712 828 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 GPR143P51810 404 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 RAB15P59190 212 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 INAQ16352 499 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 KLHL26Q53HC5 615 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 PRAMEF17Q5VTA0 474 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 KANSL1Q7Z3B3 1105 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 CPOQ8IVL8 374 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 BBS1Q8NFJ9 593 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 ZNF501Q96CX3 271 aaPredicted RBP18.73■□□□□ 0.59
HPS3-206ENST00000486530 NUDT22Q9BRQ3 303 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 OR8D2Q9GZM6 311 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 BAIAP2Q9UQB8 552 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 CABIN1Q9Y6J0 2220 aa18.73■□□□□ 0.59
HPS3-206ENST00000486530 TCRBV16S1A1N1A0A5B0 115 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 FRG2CA6NGY1 282 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 PTP4A3O75365 173 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 IL33O95760 270 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 IGKV3-11P04433 115 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 LIMS3P0CW19 117 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 LIMS4P0CW20 117 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 PNLIPP16233 465 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 SLC1A3P43003 542 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 TMED1Q13445 227 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 ARHGAP40Q5TG30 622 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 ZNF321PQ8N8H1 164 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 SLC2A12Q8TD20 617 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 DNAJA4Q8WW22 397 aaPredicted RBP18.72■□□□□ 0.59
HPS3-206ENST00000486530 EFHD2Q96C19 240 aaPredicted RBP18.72■□□□□ 0.59
HPS3-206ENST00000486530 CLIP3Q96DZ5 547 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 IFT27Q9BW83 186 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 CDADC1Q9BWV3 514 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 JAM3Q9BX67 310 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 EXOSC4Q9NPD3 245 aaKnown RBP18.72■□□□□ 0.59
HPS3-206ENST00000486530 CMC2Q9NRP2 79 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 UBQLN4Q9NRR5 601 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 FGF21Q9NSA1 209 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 SUSD2Q9UGT4 822 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 MRTO4Q9UKD2 239 aaKnown RBP18.72■□□□□ 0.59
HPS3-206ENST00000486530 FER1L5A0AVI2 2057 aa18.72■□□□□ 0.59
HPS3-206ENST00000486530 HEATR5AQ86XA9 2040 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 A8MUA0 341 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 DDAH2O95865 285 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 IGHA1P01876 353 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 NGFRP08138 427 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 ADH7P40394 386 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 CRYBB2P43320 205 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 COPZ1P61923 177 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 LIPKQ5VXJ0 399 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 THSD4Q6ZMP0 1018 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 Q6ZNX1 250 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 SHFQ7M4L6 423 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 OAFQ86UD1 273 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 PSD4Q8NDX1 1056 aa18.71■□□□□ 0.59
HPS3-206ENST00000486530 FAM71CQ8NEG0 241 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms