RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 SMPDL3BQ92485 455 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 RNF145Q96MT1 663 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 TM9SF2Q99805 663 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 USB1Q9BQ65 265 aaKnown RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 THUMPD3Q9BV44 507 aaKnown RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 CACYBPQ9HB71 228 aaKnown RBP11.23□□□□□ -0.61
HMG20B-211ENST00000486028 A4GALTQ9NPC4 353 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 SAR1AQ9NR31 198 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 VAPAQ9P0L0 249 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 GMEB1Q9Y692 573 aa11.23□□□□□ -0.61
HMG20B-211ENST00000486028 TRBV5-3A0A0A0MS03 114 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 A0A0G2JPF8 293 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MBD3L4A6NDZ8 208 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MBD3L3A6NE82 208 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MBD3L5A6NJ08 208 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 HNRNPCL2B2RXH8 293 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 HNRNPCL3B7ZW38 293 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 C5orf58C9J3I9 102 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 SEC14L5O43304 696 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 HNRNPCL1O60812 293 aaKnown RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 DNAJA2O60884 412 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 DNAJC8O75937 253 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 TOXO94900 526 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 F12P00748 615 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 BCHEP06276 602 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 HNRNPCL4P0DMR1 293 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 IL7RP16871 459 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 PGCP20142 388 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 PSMA4P25789 261 aaKnown RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 COL8A1P27658 744 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 ADSLP30566 484 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 SLC6A8P48029 635 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 CLDN20P56880 219 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 KLF10Q13118 480 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 NFYCQ13952 458 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 QPRTQ15274 297 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MAPRE2Q15555 327 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MAPK11Q15759 364 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 GCNT6Q5T4J0 391 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 PRAMEF8Q5VWM4 474 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 PRAMEF7Q5VXH5 474 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 HIST2H2BCQ6DN03 193 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 P4HA3Q7Z4N8 544 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 HMGN2P46Q86SG4 172 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 ADGRE4PQ86SQ3 457 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 GRAMD2AQ8IUY3 354 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 METTL25Q8N6Q8 603 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MBD3L2Q8NHZ7 208 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 FBXO27Q8NI29 283 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 POC1BQ8TC44 478 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 TMEM234Q8WY98 164 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 TMEM19Q96HH6 336 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 MRGPRX4Q96LA9 322 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 ZFP3Q96NJ6 502 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 TREX2Q9BQ50 279 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 QRSL1Q9H0R6 528 aaKnown RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 RUBCNLQ9H714 662 aa11.22□□□□□ -0.61
HMG20B-211ENST00000486028 EXOSC3Q9NQT5 275 aaKnown RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 ZNF629Q9UEG4 869 aaPredicted RBP11.22□□□□□ -0.61
HMG20B-211ENST00000486028 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 SLC22A20A6NK97 555 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 GJE1A6NN92 205 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 H0YC42 278 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 DVL2O14641 736 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 RCBTB2O95199 551 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 TMIGD3P0DMS9 266 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 NID1P14543 1247 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 PRKCAP17252 672 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 GPX2P18283 190 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 RPS4Y1P22090 263 aaKnown RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 CTSSP25774 331 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ELK4P28324 431 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 GRNP28799 593 aaKnown RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 SUCLG1P53597 346 aaKnown RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 TPD52P55327 224 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 CLDN15P56746 228 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 EEF1A1P68104 462 aaKnown RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 FOXF1Q12946 379 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 LARS2Q15031 903 aaKnown RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 TOMM34Q15785 309 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 SGCBQ16585 318 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ZSWIM7Q19AV6 140 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 LIN52Q52LA3 116 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 RUNDC3AQ59EK9 446 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 SLC25A53Q5H9E4 307 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 PDSS1Q5T2R2 415 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 EEF1A1P5Q5VTE0 462 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 DHDDSQ86SQ9 333 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 GGNQ86UU5 652 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 LIX1LQ8IVB5 337 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ZNF440Q8IYI8 595 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 LILRA2Q8N149 483 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 C9orf106Q8NAJ2 232 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 FAM71CQ8NEG0 241 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms