RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 COL21A1Q96P44 957 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 PKP2Q99959 881 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 G6PC3Q9BUM1 346 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 UBQLN3Q9H347 655 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 MTHFD2LQ9H903 347 aaPredicted RBP14.23□□□□□ -0.13
CPSF3-203ENST00000475482 IL1RAPQ9NPH3 570 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 RIMS3Q9UJD0 308 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 MRTO4Q9UKD2 239 aaKnown RBP14.23□□□□□ -0.13
CPSF3-203ENST00000475482 ZNF232Q9UNY5 417 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 IFT52Q9Y366 437 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 WDR45Q9Y484 360 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 FAM215AQ9Y5M1 114 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 GPC6Q9Y625 555 aaPredicted RBP14.23□□□□□ -0.13
CPSF3-203ENST00000475482 MED12Q93074 2177 aa14.23□□□□□ -0.13
CPSF3-203ENST00000475482 TRGV5A0A0B4J1U4 118 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 GNGT2O14610 69 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 ACOX3O15254 700 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 CLOCKO15516 846 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 TPST1O60507 370 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 GCM2O75603 506 aaPredicted RBP14.22□□□□□ -0.13
CPSF3-203ENST00000475482 PPM1BO75688 479 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 MFN2O95140 757 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 SNX4O95219 450 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 ATP6V1C1P21283 382 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 DRD5P21918 477 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 CASP3P42574 277 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 PPICP45877 212 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 DCST2Q5T1A1 773 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 RTL6Q6ICC9 239 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 PIWIL3Q7Z3Z3 882 aaKnown RBP14.22□□□□□ -0.13
CPSF3-203ENST00000475482 ZDHHC21Q8IVQ6 265 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 PEX5LQ8IYB4 626 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 OR5M3Q8NGP4 307 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 DIO2Q92813 273 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 HGDQ93099 445 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 TAMM41Q96BW9 452 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 SDCCAG3Q96C92 435 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 LCORQ96JN0 433 aaPredicted RBP14.22□□□□□ -0.13
CPSF3-203ENST00000475482 VSTM2LQ96N03 204 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 ITPAQ9BY32 194 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 ENKD1Q9H0I2 346 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 ARMC7Q9H6L4 198 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 RUBCNLQ9H714 662 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 COQ3Q9NZJ6 369 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 SPRR3Q9UBC9 169 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 DNAJB9Q9UBS3 223 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 SLC13A4Q9UKG4 626 aa14.22□□□□□ -0.13
CPSF3-203ENST00000475482 GPR55Q9Y2T6 319 aaPredicted RBP14.22□□□□□ -0.13
CPSF3-203ENST00000475482 DSPPQ9NZW4 1301 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 FIGNL2A6NMB9 653 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 CST1P01037 141 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 CHRM4P08173 479 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 ACVR2AP27037 513 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 MAGEA2P43356 314 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 PSMD4P55036 377 aaKnown RBP14.21□□□□□ -0.13
CPSF3-203ENST00000475482 FUT5Q11128 374 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 LARS2Q15031 903 aaKnown RBP14.21□□□□□ -0.13
CPSF3-203ENST00000475482 RPS26P11Q5JNZ5 115 aaPredicted RBP14.21□□□□□ -0.13
CPSF3-203ENST00000475482 BICRALQ6AI39 1079 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 NUP54Q7Z3B4 507 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 MCEMP1Q8IX19 187 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 FAM86B1Q8N7N1 296 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 LILRB4Q8NHJ6 448 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 NEIL3Q8TAT5 605 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 CA5BP1Q8WTZ4 195 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 ASB5Q8WWX0 329 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 RND1Q92730 232 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 EME1Q96AY2 570 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 SARAFQ96BY9 339 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 OTUB1Q96FW1 271 aaPredicted RBP14.21□□□□□ -0.13
CPSF3-203ENST00000475482 TMEM41AQ96HV5 264 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 BTBD9Q96Q07 612 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 ZNF347Q96SE7 839 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 SDF2Q99470 211 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 SPOCK3Q9BQ16 436 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 PINK1Q9BXM7 581 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 KLHL4Q9C0H6 718 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 ZNF350Q9GZX5 532 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 EVA1AQ9H8M9 152 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 KLHL28Q9NXS3 571 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 RNF6Q9Y252 685 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 SLC9A8Q9Y2E8 581 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 FAM32AQ9Y421 112 aaKnown RBP14.21□□□□□ -0.13
CPSF3-203ENST00000475482 OR10H1Q9Y4A9 318 aa14.21□□□□□ -0.13
CPSF3-203ENST00000475482 PDZD2O15018 2839 aa14.21□□□□□ -0.14
CPSF3-203ENST00000475482 PRAMEF27A3QJZ7 478 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 FRG2CA6NGY1 282 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 WDR1O75083 606 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 OPN1SWP03999 348 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 SEMG1P04279 462 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 IFNW1P05000 195 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 HPNP05981 417 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 HOXD4P09016 255 aaPredicted RBP14.2□□□□□ -0.14
CPSF3-203ENST00000475482 CT45A8P0DMV1 189 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 CT45A9P0DMV2 189 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 IGFBP2P18065 325 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 CHRNB4P30926 498 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 PTGDSP41222 190 aa14.2□□□□□ -0.14
CPSF3-203ENST00000475482 KCNJ5P48544 419 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms