RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 ANKRD28O15084 1053 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SMPD2O60906 423 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SCN2BO60939 215 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 YES1P07947 543 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 PGCP20142 388 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 AGTR1P30556 359 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SLC7A1P30825 629 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 CCKARP32238 428 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SOAT1P35610 550 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 MAP2K6P52564 334 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 FOXF1Q12946 379 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 CASP8Q14790 479 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 POU4F3Q15319 338 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 TMEM176BQ3YBM2 270 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 CEP85LQ5SZL2 805 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 OR4F3Q6IEY1 312 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 BIVMQ86UB2 503 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 CXorf67Q86X51 503 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 OR4A15Q8NGL6 344 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 RAB3IL1Q8TBN0 382 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 ZFP90Q8TF47 636 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 NEURL3Q96EH8 262 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 PIK3IP1Q96FE7 263 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SLC35G5Q96KT7 338 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SORT1Q99523 831 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SAP130Q9H0E3 1048 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 KCNK9Q9NPC2 374 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 THAP1Q9NVV9 213 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 C6orf203Q9P0P8 240 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 KLHL13Q9P2N7 655 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 SPIN1Q9Y657 262 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 KCNE3Q9Y6H6 103 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 NUP214P35658 2090 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 ZFHX3Q15911 3703 aa12.53□□□□□ -0.4
DNMT3A-211ENST00000474887 A0A1W2PPR1 153 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 EFNA2O43921 213 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 CSTAP01040 98 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 S100A3P33764 101 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 SFTPDP35247 375 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 CSNK2A1P68400 391 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 QPRTQ15274 297 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 PDZK1Q5T2W1 519 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 HHATQ5VTY9 493 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 C3orf33Q6P1S2 294 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 CMIPQ8IY22 773 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 ZNF614Q8N883 585 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 GLB1L3Q8NCI6 653 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 OR5AK3PQ8NH89 298 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 HSD17B8Q92506 261 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 CCDC115Q96NT0 180 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 CENPHQ9H3R5 247 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 TMEM185BQ9H7F4 350 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 BCO1Q9HAY6 547 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 WDR45Q9Y484 360 aa12.52□□□□□ -0.41
DNMT3A-211ENST00000474887 ESPNB1AK53 854 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 E9PBE3 544 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 HDAC3O15379 428 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 KLF4O43474 513 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 DNPH1O43598 174 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 FCMRO60667 390 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 UGT2B17O75795 530 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 OPN1LWP04000 364 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 PAX1P15863 534 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 BGNP21810 368 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 HTR3AP46098 478 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 KHKP50053 298 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 SKP2Q13309 424 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 GNA13Q14344 377 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 PDK3Q15120 406 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 GPR68Q15743 365 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 SAXO2Q658L1 398 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 ATG16L1Q676U5 607 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 PLEKHM3Q6ZWE6 761 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 CLECL1Q8IZS7 167 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 GABRG1Q8N1C3 465 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 TMCO5AQ8N6Q1 288 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 OR5D16Q8NGK9 328 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 XAGE5Q8WWM1 108 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 ROPN1LQ96C74 230 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 C18orf12Q96KH6 178 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 ZBTB18Q99592 522 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 NPAS1Q99742 590 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 C20orf27Q9GZN8 174 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 OR51I1Q9H343 314 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 CLEC4AQ9UMR7 237 aa12.51□□□□□ -0.41
DNMT3A-211ENST00000474887 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
DNMT3A-211ENST00000474887 SIAH2O43255 324 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms