RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 THUMPD3Q9BV44 507 aaKnown RBP17.03■□□□□ 0.32
PTCD3-210ENST00000473829 RABEP2Q9H5N1 569 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 IKZF5Q9H5V7 419 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 CACNA1DQ01668 2161 aa17.03■□□□□ 0.32
PTCD3-210ENST00000473829 ITPR2Q14571 2701 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 SLC22A20A6NK97 555 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 ETV2O00321 342 aaPredicted RBP17.02■□□□□ 0.32
PTCD3-210ENST00000473829 EIF1AYO14602 144 aaKnown RBP17.02■□□□□ 0.32
PTCD3-210ENST00000473829 DVL2O14641 736 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 EIF1P41567 113 aaKnown RBP17.02■□□□□ 0.32
PTCD3-210ENST00000473829 DLX5P56178 289 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 RAC1P63000 192 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 KCNJ10P78508 379 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 CBFBQ13951 182 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 SLC25A53Q5H9E4 307 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 RETREG3Q86VR2 466 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 FNDC9Q8TBE3 224 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 CNOT9Q92600 299 aaKnown RBP17.02■□□□□ 0.32
PTCD3-210ENST00000473829 TMEM19Q96HH6 336 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 ZNF629Q9UEG4 869 aaPredicted RBP17.02■□□□□ 0.32
PTCD3-210ENST00000473829 SLC35A3Q9Y2D2 325 aa17.02■□□□□ 0.32
PTCD3-210ENST00000473829 GPC6Q9Y625 555 aaPredicted RBP17.02■□□□□ 0.32
PTCD3-210ENST00000473829 MAST4O15021 2626 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 A0A0J9YW62 118 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 TNFSF11O14788 317 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 BMP2P12643 396 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 ELK4P28324 431 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 EIF1AXP47813 144 aaKnown RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 SLC6A8P48029 635 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 ARFIP2P53365 341 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 EEFSECP57772 596 aaKnown RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 PON3Q15166 354 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 METTL21CQ5VZV1 264 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 DLEU7Q6UYE1 221 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 MEX3BQ6ZN04 569 aaKnown RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 CHMP1BQ7LBR1 199 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 LILRA2Q8N149 483 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 OR10D3Q8NH80 312 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 WDR60Q8WVS4 1066 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 MAL2Q969L2 176 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 MRGPRX4Q96LA9 322 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 ZNF317Q96PQ6 595 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 SPOCK3Q9BQ16 436 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 TRIM8Q9BZR9 551 aa17.01■□□□□ 0.31
PTCD3-210ENST00000473829 MTHFD2LQ9H903 347 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 DNAJB12Q9NXW2 375 aaKnown RBP17.01■□□□□ 0.31
PTCD3-210ENST00000473829 AP3D1O14617 1153 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 ADAMDEC1O15204 470 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 CXCL13O43927 109 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 TNFSF13O75888 250 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 AQP8O94778 261 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 ADH6P28332 368 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 SFTPDP35247 375 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 SESN3P58005 492 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 RPS3AP61247 264 aaKnown RBP17■□□□□ 0.31
PTCD3-210ENST00000473829 FADDQ13158 208 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 P4HA3Q7Z4N8 544 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 VRK2Q86Y07 508 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 MCEMP1Q8IX19 187 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 ZNF295-AS1Q8N0V1 137 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 OR2V1Q8NHB1 315 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 KLHL15Q96M94 604 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 ZFP3Q96NJ6 502 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 CPPED1Q9BRF8 314 aaPredicted RBP17■□□□□ 0.31
PTCD3-210ENST00000473829 A4GALTQ9NPC4 353 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 EXOSC3Q9NQT5 275 aaKnown RBP17■□□□□ 0.31
PTCD3-210ENST00000473829 LEF1Q9UJU2 399 aaPredicted RBP17■□□□□ 0.31
PTCD3-210ENST00000473829 ZNF175Q9Y473 711 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 GMEB1Q9Y692 573 aa17■□□□□ 0.31
PTCD3-210ENST00000473829 NAV2Q8IVL1 2488 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 A0A1W2PNV4 684 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 IL18BPO95998 194 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 DBIP07108 87 aaKnown RBP16.99■□□□□ 0.31
PTCD3-210ENST00000473829 NID1P14543 1247 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 ME2P23368 584 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 RYKP34925 604 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 OPRM1P35372 400 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 ASCL1P50553 236 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 CRISP3P54108 245 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 MRPL2Q5T653 305 aaKnown RBP16.99■□□□□ 0.31
PTCD3-210ENST00000473829 ZNF836Q6ZNA1 936 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 ESPNLQ6ZVH7 1005 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 DHDDSQ86SQ9 333 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 DMRTC2Q8IXT2 367 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-210ENST00000473829 ST8SIA1Q92185 356 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 SFXN3Q9BWM7 321 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 RAD21L1Q9H4I0 556 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 COQ10BQ9H8M1 238 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 RNF122Q9H9V4 155 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 THUMPD1Q9NXG2 353 aaKnown RBP16.99■□□□□ 0.31
PTCD3-210ENST00000473829 CALML5Q9NZT1 146 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 JKAMPQ9P055 326 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 STOML1Q9UBI4 398 aa16.99■□□□□ 0.31
PTCD3-210ENST00000473829 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-210ENST00000473829 EEF1E1-BLOC1S5C9J1V9 151 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 FBP2O00757 339 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 EEF1E1O43324 174 aaKnown RBP16.98■□□□□ 0.31
PTCD3-210ENST00000473829 IL7RP16871 459 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms