RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ARL2BPQ9Y2Y0 163 aa17.83■□□□□ 0.44
HDAC7-220ENST00000471235 SPTAN1Q13813 2472 aaKnown RBP17.83■□□□□ 0.44
HDAC7-220ENST00000471235 SEC14L5O43304 696 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 ADAM11O75078 769 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 NPPAP01160 153 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 THBS1P07996 1170 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 SMSP52788 366 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 EEF1A1P68104 462 aaKnown RBP17.82■□□□□ 0.44
HDAC7-220ENST00000471235 PMPCAQ10713 525 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 RABL3Q5HYI8 236 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 RNF220Q5VTB9 566 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 REEP3Q6NUK4 255 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 MRGPRGQ86SM5 289 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 ZZZ3Q8IYH5 903 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF808Q8N4W9 903 aaPredicted RBP17.82■□□□□ 0.44
HDAC7-220ENST00000471235 OR8J3Q8NGG0 315 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 FBXO27Q8NI29 283 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 ZPLD1Q8TCW7 415 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 GPC6Q9Y625 555 aaPredicted RBP17.82■□□□□ 0.44
HDAC7-220ENST00000471235 AP4B1Q9Y6B7 739 aa17.82■□□□□ 0.44
HDAC7-220ENST00000471235 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CDHR4A6H8M9 788 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 H0YC42 278 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 ETV2O00321 342 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 NTN1O95631 604 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 EPPINO95925 133 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 PABPC4LP0CB38 370 aaKnown RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 PGCP20142 388 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 IL11P20809 199 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 ELK4P28324 431 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 EIF1P41567 113 aaKnown RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 GZMMP51124 257 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 TPD52P55327 224 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CLDN15P56746 228 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CLDN20P56880 219 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 LARS2Q15031 903 aaKnown RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 SLC25A53Q5H9E4 307 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 NSUN5P2Q63ZY6 315 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 SERPINA11Q86U17 422 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 GGNQ86UU5 652 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 LACC1Q8IV20 430 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 MEIOBQ8N635 442 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 C11orf65Q8NCR3 313 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 HIPK4Q8NE63 616 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 OR10A6Q8NH74 314 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 RND1Q92730 232 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 TRIB1Q96RU8 372 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CCT8L2Q96SF2 557 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CACYBPQ9HB71 228 aaKnown RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 GID8Q9NWU2 228 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 ANGPT4Q9Y264 503 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CHST2Q9Y4C5 530 aa17.81■□□□□ 0.44
HDAC7-220ENST00000471235 USP9YO00507 2555 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-220ENST00000471235 CLCA1A8K7I4 914 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 AP3D1O14617 1153 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 ETS2P15036 469 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 SLC6A2P23975 617 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 SLC6A8P48029 635 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 SUCLG1P53597 346 aaKnown RBP17.8■□□□□ 0.44
HDAC7-220ENST00000471235 RBBP4Q09028 425 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 SF3B4Q15427 424 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■■■■■ 27.1
HDAC7-220ENST00000471235 CDSNQ15517 529 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 ADGRE4PQ86SQ3 457 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 ST8SIA1Q92185 356 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 MRGPRX4Q96LA9 322 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 PSMG3-AS1Q96PY0 264 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 SPATA9Q9BWV2 254 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 TMEM185BQ9H7F4 350 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 RLIMQ9NVW2 624 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 CLCF1Q9UBD9 225 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 RNF6Q9Y252 685 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 IFT52Q9Y366 437 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 COL12A1Q99715 3063 aa17.8■□□□□ 0.44
HDAC7-220ENST00000471235 A0A0G2JNJ9 132 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 A1L4Q6 167 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 CD8B2A6NJW9 211 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 AIM2O14862 343 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 EFNA2O43921 213 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 TOXO94900 526 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 FAM107AO95990 144 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 AGAP20933 346 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 ADH6P28332 368 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 SHC1P29353 583 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 AQP1P29972 269 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 PRDX6P30041 224 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 RYKP34925 604 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 PCGF2P35227 344 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 DLX5P56178 289 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 SESN3P58005 492 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 ZNF311Q5JNZ3 666 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 RIPPLY2Q5TAB7 128 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 PLXDC2Q6UX71 529 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 CALHM3Q86XJ0 350 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 KRT73Q86Y46 540 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 GRAMD2AQ8IUY3 354 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 CLIP4Q8N3C7 705 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 SDCCAG3Q96C92 435 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 SH3GL1Q99961 368 aa17.79■□□□□ 0.44
HDAC7-220ENST00000471235 RSPO3Q9BXY4 272 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-220ENST00000471235 CALHM2Q9HA72 323 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms