RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RNF145Q96MT1 663 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 TTYH2Q9BSA4 534 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 RSPO3Q9BXY4 272 aaPredicted RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 GID8Q9NWU2 228 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 CAMK2AQ9UQM7 478 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 ZNF443Q9Y2A4 671 aaPredicted RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 GPC6Q9Y625 555 aaPredicted RBP18.35■□□□□ 0.53
SKA3-205ENST00000465471 AP4B1Q9Y6B7 739 aa18.35■□□□□ 0.53
SKA3-205ENST00000465471 KIAA1549Q9HCM3 1950 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 C5orf58C9J3I9 102 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 GLI4P10075 376 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 SLC6A2P23975 617 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 ELK4P28324 431 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 PRDX6P30041 224 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 SCARB2Q14108 478 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 QPRTQ15274 297 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 RABL3Q5HYI8 236 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 FAM91A1Q658Y4 838 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 SEM1Q6ZVN7 128 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 CALHM3Q86XJ0 350 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 ZZZ3Q8IYH5 903 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 HIPK4Q8NE63 616 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 UCN2Q96RP3 112 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 SH3GL1Q99961 368 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 GPATCH1Q9BRR8 931 aaKnown RBP18.34■□□□□ 0.53
SKA3-205ENST00000465471 SPATA9Q9BWV2 254 aa18.34■□□□□ 0.53
SKA3-205ENST00000465471 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 KDM4EB2RXH2 506 aaPredicted RBP18.33■□□□□ 0.52
SKA3-205ENST00000465471 FAAHO00519 579 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 NUDT14O95848 222 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 EPPINO95925 133 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 PABPC4LP0CB38 370 aaKnown RBP18.33■□□□□ 0.52
SKA3-205ENST00000465471 POU3F2P20265 443 aaPredicted RBP18.33■□□□□ 0.52
SKA3-205ENST00000465471 AGAP20933 346 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 CCR4P51679 360 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 PCBP3P57721 371 aaKnown RBP18.33■□□□□ 0.52
SKA3-205ENST00000465471 NUP107P57740 925 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 CYP51A1Q16850 503 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 ZSWIM7Q19AV6 140 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 NSUN5P2Q63ZY6 315 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 C8orf82Q6P1X6 216 aaPredicted RBP18.33■□□□□ 0.52
SKA3-205ENST00000465471 GGNQ86UU5 652 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 C11orf65Q8NCR3 313 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 OR10A6Q8NH74 314 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 FBXO27Q8NI29 283 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 ST8SIA1Q92185 356 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 MRGPRX4Q96LA9 322 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 PSMG3-AS1Q96PY0 264 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 TUBA1CQ9BQE3 449 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 IFT52Q9Y366 437 aa18.33■□□□□ 0.52
SKA3-205ENST00000465471 SPTBN1Q01082 2364 aaKnown RBP18.32■□□□□ 0.52
SKA3-205ENST00000465471 CD8B2A6NJW9 211 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 H0Y3Z8 333 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 H3BML4 177 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 EFNA2O43921 213 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 CYP7B1O75881 506 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 PGCP20142 388 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 PCGF2P35227 344 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 SLC6A8P48029 635 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 SUCLG1P53597 346 aaKnown RBP18.32■□□□□ 0.52
SKA3-205ENST00000465471 CLDN20P56880 219 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 LARS2Q15031 903 aaKnown RBP18.32■□□□□ 0.52
SKA3-205ENST00000465471 SF3B4Q15427 424 aaKnown RBP eCLIP18.32■□□□□ 0.52
SKA3-205ENST00000465471 HACD2Q6Y1H2 254 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 LACC1Q8IV20 430 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 ZNF808Q8N4W9 903 aaPredicted RBP18.32■□□□□ 0.52
SKA3-205ENST00000465471 CMTM5Q96DZ9 223 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 ADGRG7Q96K78 797 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 CALHM2Q9HA72 323 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 RLIMQ9NVW2 624 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 ALKBH4Q9NXW9 302 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 CLCF1Q9UBD9 225 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 ANGPT4Q9Y264 503 aa18.32■□□□□ 0.52
SKA3-205ENST00000465471 MBD3L4A6NDZ8 208 aaPredicted RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 MBD3L3A6NE82 208 aaPredicted RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 MBD3L5A6NJ08 208 aaPredicted RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 H0YC42 278 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 GCM2O75603 506 aaPredicted RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 DCTN3O75935 186 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 TOXO94900 526 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 IL11P20809 199 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 PRKAR1BP31321 381 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 SMSP52788 366 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 TPD52P55327 224 aaPredicted RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 RAC1P63000 192 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 SRYQ05066 204 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 PMPCAQ10713 525 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 EPS8Q12929 822 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 CTU2Q2VPK5 515 aaKnown RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 RIPPLY2Q5TAB7 128 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 MRGPRGQ86SM5 289 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 ZNF440Q8IYI8 595 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 CLIP4Q8N3C7 705 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 MBD3L2Q8NHZ7 208 aaPredicted RBP18.31■□□□□ 0.52
SKA3-205ENST00000465471 SLC35B4Q969S0 331 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 EFCAB1Q9HAE3 211 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 ACER3Q9NUN7 267 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 PRDM4Q9UKN5 801 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 ZNF232Q9UNY5 417 aa18.31■□□□□ 0.52
SKA3-205ENST00000465471 CLCA1A8K7I4 914 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms