RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-204	ENST00000463685	THY1	P04216	161 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	RFPL3S	P0C7P2	107 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	MST1	P26927	711 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	TAS2R41	P59536	307 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	FOXK1	P85037	733 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	CBFB	Q13951	182 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	QPRT	Q15274	297 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	RCN1	Q15293	331 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	OR1Q1	Q15612	314 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	COLEC12	Q5KU26	742 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	HMBOX1	Q6NT76	420 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	ZFP1	Q6P2D0	407 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	ASB18	Q6ZVZ8	466 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	PLEKHM3	Q6ZWE6	761 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	AMIGO2	Q86SJ2	522 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	LILRA2	Q8N149	483 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	TOR1AIP2	Q8NFQ8	470 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	POP5	Q969H6	163 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	NPAS1	Q99742	590 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	PKP2	Q99959	881 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	ARMC1	Q9NVT9	282 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	TES	Q9UGI8	421 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	A4GNT	Q9UNA3	340 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	TESMIN	Q9Y4I5	508 aa		13.63	□□□□□ -0.23
ABCF3-204	ENST00000463685	BSN	Q9UPA5	3926 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685		A0A1B0GWA3	101 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	FAM166B	A8MTA8	275 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PRSS23	O95084	383 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	RHCE	P18577	417 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PTN	P21246	168 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	MSX1	P28360	303 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	SLC6A8	P48029	635 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PPP1R8	Q12972	351 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	AAGAB	Q6PD74	315 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	C10orf67	Q8IYJ2	551 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	OR5M1	Q8NGP8	315 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	ZNF563	Q8TA94	476 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	SLC35B4	Q969S0	331 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PIP5K1A	Q99755	562 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	TRIM2	Q9C040	744 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	ZFP64	Q9NPA5	681 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	MED17	Q9NVC6	651 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	LUZP4	Q9P127	313 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	RIMS3	Q9UJD0	308 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	BOK	Q9UMX3	212 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	VDAC3	Q9Y277	283 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	C15orf41	Q9Y2V0	281 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	FAM32A	Q9Y421	112 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PKD1L2	Q7Z442	2459 aa		13.62	□□□□□ -0.23
ABCF3-204	ENST00000463685	PIEZO2	Q9H5I5	2752 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	NCKAP5	O14513	1909 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	HNRNPR	O43390	633 aa	Known RBP	13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	FMO6P	O60774	539 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	LYPD3	O95274	346 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	CST1	P01037	141 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	GP1BB	P13224	206 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	ITGA2	P17301	1181 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	PGC	P20142	388 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	RRM2	P31350	389 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	IST1	P53990	364 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	CDH12	P55289	794 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	SUMO3	P55854	103 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	SESN3	P58005	492 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	SPIB	Q01892	262 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	PLGLB1	Q02325	96 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	ZNF169	Q14929	603 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	TOMM20	Q15388	145 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	NADK2	Q4G0N4	442 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	POMZP3	Q6PJE2	187 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685		Q6ZS92	163 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	GDF7	Q7Z4P5	450 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	CYP4Z1	Q86W10	505 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	EXD3	Q8N9H8	876 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	TMEM178A	Q8NBL3	297 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	OR52J3	Q8NH60	311 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	RNF217	Q8TC41	542 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	ADAMTS16	Q8TE57	1224 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	RELT	Q969Z4	430 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	C1GALT1C1	Q96EU7	318 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	SLC41A3	Q96GZ6	507 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	PRRC1	Q96M27	445 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	TTTY12	Q9BZ98	90 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	SEMA6A	Q9H2E6	1030 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	YY1AP1	Q9H869	796 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	EVA1A	Q9H8M9	152 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	TMEM27	Q9HBJ8	222 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	TAS2R10	Q9NYW0	307 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	RPS6KB2	Q9UBS0	482 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	DKKL1	Q9UK85	242 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	PCDHGB7	Q9Y5F8	929 aa		13.61	□□□□□ -0.23
ABCF3-204	ENST00000463685	BOD1L1	Q8NFC6	3051 aa		13.6	□□□□□ -0.23
ABCF3-204	ENST00000463685	TRAPPC13	A5PLN9	417 aa		13.6	□□□□□ -0.23
ABCF3-204	ENST00000463685	KLRC4-KLRK1	H3BQV0	150 aa		13.6	□□□□□ -0.23
ABCF3-204	ENST00000463685	CLOCK	O15516	846 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms