RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PRKCAP17252 672 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 ADH6P28332 368 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 CCR4P51679 360 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 QPRTQ15274 297 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 ZSWIM7Q19AV6 140 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 SLC25A53Q5H9E4 307 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 C1orf185Q5T7R7 199 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 FAM91A1Q658Y4 838 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 C8orf82Q6P1X6 216 aaPredicted RBP25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 HACD2Q6Y1H2 254 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 GRAMD2AQ8IUY3 354 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 MARVELD2Q8N4S9 558 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 RNF145Q96MT1 663 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 ECSITQ9BQ95 431 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 RSPO3Q9BXY4 272 aaPredicted RBP25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 RLIMQ9NVW2 624 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 AP4B1Q9Y6B7 739 aa25.27■■□□□ 1.64
SMARCC1-203ENST00000454240 TNFSF12-TNFSF13A0A0A6YY99 330 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 ADAM11O75078 769 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 NTN1O95631 604 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 PGCP20142 388 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 PCBP3P57721 371 aaKnown RBP25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 ADORA2A-AS1P86434 159 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 FOXF1Q12946 379 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 ZNF311Q5JNZ3 666 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 TMEM211Q6ICI0 200 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 NCCRP1Q6ZVX7 275 aaPredicted RBP25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 ZPLD1Q8TCW7 415 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 CACYBPQ9HB71 228 aaKnown RBP25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 ANGPT4Q9Y264 503 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 PCNX1Q96RV3 2341 aa25.26■■□□□ 1.63
SMARCC1-203ENST00000454240 H3BML4 177 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 ZG16O60844 167 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 POU3F2P20265 443 aaPredicted RBP25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 SLC6A8P48029 635 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 CLDN15P56746 228 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 SRYQ05066 204 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 ART3Q13508 389 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 SF3B4Q15427 424 aaKnown RBP eCLIP25.25■■□□□ 1.632e-6■■■□□ 17
SMARCC1-203ENST00000454240 ACSF3Q4G176 576 aaPredicted RBP25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 B3GNT6Q6ZMB0 384 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 KRT73Q86Y46 540 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 SLC30A8Q8IWU4 369 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 CLIP4Q8N3C7 705 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 CCDC197Q8NCU1 140 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 FBXO27Q8NI29 283 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 ST8SIA1Q92185 356 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 MRGPRX4Q96LA9 322 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 ZNF583Q96ND8 569 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 HOPXQ9BPY8 73 aaPredicted RBP25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 TTYH2Q9BSA4 534 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 PIF1Q9H611 641 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 KIAA1549Q9HCM3 1950 aa25.25■■□□□ 1.63
SMARCC1-203ENST00000454240 GCM2O75603 506 aaPredicted RBP25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 EPPINO95925 133 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 PCGF2P35227 344 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 NUDT2P50583 147 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 DLX5P56178 289 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 RAC1P63000 192 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 VMACQ2NL98 169 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 ARPINQ7Z6K5 226 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 ZNF440Q8IYI8 595 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 ZNF607Q96SK3 696 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 TUBA1CQ9BQE3 449 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 SPATA5L1Q9BVQ7 753 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 ARMC7Q9H6L4 198 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 CMTM6Q9NX76 183 aa25.24■■□□□ 1.63
SMARCC1-203ENST00000454240 EFNA2O43921 213 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 GLI4P10075 376 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 ELK4P28324 431 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 AQP1P29972 269 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 PRKAR1BP31321 381 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 RYKP34925 604 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 SUCLG1P53597 346 aaKnown RBP25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 SESN3P58005 492 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 PMPCAQ10713 525 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 RPTNQ6XPR3 784 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 ADGRE4PQ86SQ3 457 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 SLC15A3Q8IY34 581 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 FITM2Q8N6M3 262 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 TMEM234Q8WY98 164 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 REXO5Q96IC2 774 aaKnown RBP25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 ACER3Q9NUN7 267 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 ARL8BQ9NVJ2 186 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 STOML1Q9UBI4 398 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 AP3M1Q9Y2T2 418 aa25.23■■□□□ 1.63
SMARCC1-203ENST00000454240 KDM4EB2RXH2 506 aaPredicted RBP25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 H0Y3Z8 333 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 FAAHO00519 579 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 AP3D1O14617 1153 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 SERPINB7O75635 380 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 IL11P20809 199 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 CLDN20P56880 219 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 NUP107P57740 925 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 EPS8Q12929 822 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 NSUN5P2Q63ZY6 315 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 DHRS4L2Q6PKH6 230 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 SEM1Q6ZVN7 128 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 GGNQ86UU5 652 aa25.22■■□□□ 1.63
SMARCC1-203ENST00000454240 UBQLNLQ8IYU4 475 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms