RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF440Q8IYI8 595 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF808Q8N4W9 903 aaPredicted RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 HIPK4Q8NE63 616 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 OR10A6Q8NH74 314 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ZPLD1Q8TCW7 415 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 MRGPRX4Q96LA9 322 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 TRIB1Q96RU8 372 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 SLC39A3Q9BRY0 314 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 TTYH2Q9BSA4 534 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 MYLK2Q9H1R3 596 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 EFCAB1Q9HAE3 211 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 EXOSC3Q9NQT5 275 aaKnown RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF443Q9Y2A4 671 aaPredicted RBP12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 FAM215AQ9Y5M1 114 aa12.67□□□□□ -0.38
GTF3C3-206ENST00000448539 USP9XQ93008 2570 aaPredicted RBP12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 WIPF3A6NGB9 483 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 SERPINB7O75635 380 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 EPPINO95925 133 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 FAM107AO95990 144 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 PABPC4LP0CB38 370 aaKnown RBP12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 ETS2P15036 469 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 ADH6P28332 368 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 CLDN18P56856 261 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 NUP107P57740 925 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 RPS3AP61247 264 aaKnown RBP12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 RAC1P63000 192 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 ADORA2A-AS1P86434 159 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 SELPLGQ14242 412 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 TMEM44Q2T9K0 475 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 PDSS1Q5T2R2 415 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 NSUN5P2Q63ZY6 315 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 RTL6Q6ICC9 239 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 ARPINQ7Z6K5 226 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 SERPINA11Q86U17 422 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 TREML1Q86YW5 311 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 LACC1Q8IV20 430 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 C10orf111Q8N326 155 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 RPRMLQ8N4K4 120 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 MARVELD2Q8N4S9 558 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 FAM71CQ8NEG0 241 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 FBXO27Q8NI29 283 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 CNOT9Q92600 299 aaKnown RBP12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 LRRC37BQ96QE4 947 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 KLHDC3Q9BQ90 382 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 SPATA9Q9BWV2 254 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 KAT8Q9H7Z6 458 aaKnown RBP12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 CALHM2Q9HA72 323 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 ADAM21Q9UKJ8 722 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 AP3M1Q9Y2T2 418 aa12.66□□□□□ -0.38
GTF3C3-206ENST00000448539 FREM3P0C091 2139 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 PRORSD1PA6NEY8 169 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 CFAP73A6NFT4 308 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 GJE1A6NN92 205 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 BCAS1O75363 584 aaPredicted RBP12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 IL2RAP01589 272 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 GLI4P10075 376 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 PRKCAP17252 672 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 AGAP20933 346 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 ELK4P28324 431 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 AQP1P29972 269 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 PRDX6P30041 224 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 SESN3P58005 492 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 ADRM1Q16186 407 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 SGCBQ16585 318 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 RABL3Q5HYI8 236 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 INTS11Q5TA45 600 aaKnown RBP12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF836Q6ZNA1 936 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 ZNF550Q7Z398 422 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 P4HA3Q7Z4N8 544 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 NET1Q7Z628 596 aaPredicted RBP12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 ITLN2Q8WWU7 325 aaPredicted RBP12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 ASB5Q8WWX0 329 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 SDCCAG3Q96C92 435 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 PIF1Q9H611 641 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 SERINC1Q9NRX5 453 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 SLC13A4Q9UKG4 626 aa12.65□□□□□ -0.38
GTF3C3-206ENST00000448539 USP9YO00507 2555 aaPredicted RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 CDHR4A6H8M9 788 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 CD8B2A6NJW9 211 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 FXYD1O00168 92 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 EIF1AYO14602 144 aaKnown RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 DNAJA2O60884 412 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 SHOX2O60902 331 aaPredicted RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 OPN1LWP04000 364 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 RNF224P0DH78 156 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 PRKAR1BP31321 381 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 IDH2P48735 452 aaKnown RBP12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 NUDT2P50583 147 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 CLDN20P56880 219 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 COPZ1P61923 177 aa12.64□□□□□ -0.39
GTF3C3-206ENST00000448539 EEF1A1P68104 462 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms