RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 ITPR1Q14643 2758 aa11.97□□□□□ -0.49
TIMP1-204ENST00000445623 TTLL8A6PVC2 850 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 M0R3H8 397 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 FRS3O43559 492 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 PRKD3O94806 890 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 EPPINO95925 133 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 UMPSP11172 480 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 GP1BBP13224 206 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 NQO1P15559 274 aaKnown RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 ZNF17P17021 662 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 PSMA4P25789 261 aaKnown RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 HTR3AP46098 478 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 IDH2P48735 452 aaKnown RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 PLAURQ03405 335 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 QPRTQ15274 297 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 FAM98BQ52LJ0 330 aaKnown RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 WBP2NLQ6ICG8 309 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 VTCN1Q7Z7D3 282 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 SPATA24Q86W54 205 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 CADM2Q8N3J6 435 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 CISD2Q8N5K1 135 aaKnown RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 FAM83FQ8NEG4 500 aaPredicted RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 SLC47A1Q96FL8 570 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
TIMP1-204ENST00000445623 MRGPRX4Q96LA9 322 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 TRIM2Q9C040 744 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 LDAHQ9H6V9 325 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 MAGIXQ9H6Y5 334 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 EXO5Q9H790 373 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 ZDHHC11Q9H8X9 412 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 TMEM27Q9HBJ8 222 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 ACKR4Q9NPB9 350 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 ACER3Q9NUN7 267 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 VDAC3Q9Y277 283 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 HRH3Q9Y5N1 445 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 V9GYQ6 96 aa11.96□□□□□ -0.49
TIMP1-204ENST00000445623 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 C7orf72A4D263 438 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 NPIPA5E9PKD4 350 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 LINC01387J3KSC0 135 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 HCN1O60741 890 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 GPIP06744 558 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ITGA2P17301 1181 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ADH6P28332 368 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ACAA2P42765 397 aaKnown RBP11.95□□□□□ -0.5
TIMP1-204ENST00000445623 SLC1A3P43003 542 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 OR1E2P47887 323 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ZNF136P52737 540 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 CHRNB3Q05901 458 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 KRTCAP3Q53RY4 240 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 RAET1LQ5VY80 246 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 AAGABQ6PD74 315 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ENPP6Q6UWR7 440 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ARSKQ6UWY0 536 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 DEF8Q6ZN54 512 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 PLEKHM3Q6ZWE6 761 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 ZNF771Q7L3S4 317 aaPredicted RBP11.95□□□□□ -0.5
TIMP1-204ENST00000445623 GRINAQ7Z429 371 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 COMTD1Q86VU5 262 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 CYP4Z1Q86W10 505 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 OR6T1Q8NGN1 323 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 OR10Q1Q8NGQ4 319 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 FAR1Q8WVX9 515 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 NR4A3Q92570 626 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
TIMP1-204ENST00000445623 SFXN2Q96NB2 322 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 MCHR1Q99705 422 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 RSPO3Q9BXY4 272 aaPredicted RBP11.95□□□□□ -0.5
TIMP1-204ENST00000445623 STOML1Q9UBI4 398 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 NPIPA1Q9UND3 350 aa11.95□□□□□ -0.5
TIMP1-204ENST00000445623 FAM32AQ9Y421 112 aaKnown RBP11.95□□□□□ -0.5
TIMP1-204ENST00000445623 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
TIMP1-204ENST00000445623 NCKAP5O14513 1909 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 TRGV5A0A0B4J1U4 118 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 TCRBV5S2A0A599 114 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 DHRS12A0PJE2 317 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 EIF4E1BA6NMX2 242 aaKnown RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 TMEM229AB2RXF0 380 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 B4DXG7 233 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 ETV2O00321 342 aaPredicted RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 FABP3P05413 133 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 PRG2P13727 222 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 PRKCAP17252 672 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 TNFRSF1BP20333 461 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 ELK4P28324 431 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 APOBEC1P41238 236 aaKnown RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SESN3P58005 492 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 HOXC5Q00444 222 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 FOXF1Q12946 379 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 CMPK2Q5EBM0 449 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SLC25A53Q5H9E4 307 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 WIPI1Q5MNZ9 446 aaPredicted RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 ZNF613Q6PF04 617 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 YRDCQ86U90 279 aaKnown RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 LACC1Q8IV20 430 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SIAH3Q8IW03 269 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms