RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 NPPBP16860 134 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CR2P20023 1033 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 EIF1P41567 113 aaKnown RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CXCR4P61073 352 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 DNASE1L3Q13609 305 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 OR8H3Q8N146 312 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 BCL7CQ8WUZ0 217 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 C12orf4Q9NQ89 552 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 ZSCAN5BA6NJL1 495 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 PRRT4C9JH25 899 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 MRPL33O75394 65 aaKnown RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 RAB3AP20336 220 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CHMP24386 653 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SLC48A1Q6P1K1 146 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 KCTD20Q7Z5Y7 419 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 VRK3Q8IV63 474 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 OR5W2Q8NH69 310 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 AMDHD1Q96NU7 426 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 PHOX2BQ99453 314 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF471Q9BX82 626 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 PDFQ9HBH1 243 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CAMK2AQ9UQM7 478 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 POLHQ9Y253 713 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 MYO18AQ92614 2054 aaKnown RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 T-ENOLP0DO92 83 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 TSPAN31Q12999 210 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 PTPRRQ15256 657 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 TCEAL3Q969E4 200 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 CCDC32Q9BV29 185 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 RAC2P15153 192 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 IFNGR1P15260 489 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 CHRNEQ04844 493 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 COL9A2Q14055 689 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-202ENST00000413872 FRMPD2BQ6IN97 320 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 GRAMD2AQ8IUY3 354 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 CMIPQ8IY22 773 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 RNF175Q8N4F7 328 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 SLC6A17Q9H1V8 727 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 FOLH1BQ9HBA9 442 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 WASH6PQ9NQA3 447 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 UCKL1Q9NWZ5 548 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 TEX10Q9NXF1 929 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-202ENST00000413872 SLC35A1P78382 337 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF431Q8TF32 576 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF597Q96LX8 424 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 ABCG5Q9H222 651 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 SLC6A20Q9NP91 592 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 MBNL1Q9NR56 388 aaKnown RBP16.13■□□□□ 0.17
PHRF1-202ENST00000413872 CDC14CA4D256 554 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 PFN3P60673 137 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 TMEM163Q8TC26 289 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 UCN3Q969E3 161 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 FOXRED1Q96CU9 486 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-202ENST00000413872 FAM71F1Q96KD3 344 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-202ENST00000413872 SYT4Q9H2B2 425 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 MED17Q9NVC6 651 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 ASIC5Q9NY37 505 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 HHLA2Q9UM44 414 aa16.13■□□□□ 0.17
PHRF1-202ENST00000413872 SLC16A7O60669 478 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 BMP4P12644 408 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 SOX3P41225 446 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 FNTBP49356 437 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 Q6ZNB5 142 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 NLRP8Q86W28 1048 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 COQ8AQ8NI60 647 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 TM4SF18Q96CE8 201 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 MUCL1Q96DR8 90 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 NEURL3Q96EH8 262 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF350Q9GZX5 532 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 KLHL9Q9P2J3 617 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 TRAV6A0A075B6T7 132 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 PLSCR5A0PG75 271 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 HTR3BO95264 441 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 TACR1P25103 407 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 POU3F1Q03052 451 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 TP53I3Q53FA7 332 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 LSMEM2Q8N112 164 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 CNEP1R1Q8N9A8 125 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 RCBTB1Q8NDN9 531 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 OR9K2Q8NGE7 335 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 DHCR7Q9UBM7 475 aaKnown RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 IL32P24001 234 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 SLC22A10Q63ZE4 541 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 WDR53Q7Z5U6 358 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 BPHLQ86WA6 291 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 OR5H2Q8NGV7 314 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 SCGB1C1Q8TD33 95 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 IP6K3Q96PC2 410 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 TWSG1Q9GZX9 223 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 CD97P48960 835 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 STK11Q15831 433 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 ARSKQ6UWY0 536 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 LANCL3Q6ZV70 420 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 MEPCEQ7L2J0 689 aaKnown RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 OR5D14Q8NGL3 314 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 SLC25A44Q96H78 314 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 IL21Q9HBE4 155 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 ZFP57Q9NU63 452 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 ASB4Q9Y574 426 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms