RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CBFBQ13951 182 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 SCARB2Q14108 478 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 QPRTQ15274 297 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 B3GNT6Q6ZMB0 384 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 SERPINA11Q86U17 422 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 CALHM3Q86XJ0 350 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 ZZZ3Q8IYH5 903 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 ANKS4BQ8N8V4 417 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 OR10A6Q8NH74 314 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 ZPLD1Q8TCW7 415 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 TUBA1CQ9BQE3 449 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 RLIMQ9NVW2 624 aa20.18■□□□□ 0.82
PTCD3-203ENST00000409783 GPC6Q9Y625 555 aaPredicted RBP20.18■□□□□ 0.82
PTCD3-203ENST00000409783 SPTBN1Q01082 2364 aaKnown RBP20.18■□□□□ 0.82
PTCD3-203ENST00000409783 SPTAN1Q13813 2472 aaKnown RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 CDHR4A6H8M9 788 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 C5orf58C9J3I9 102 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 FAM47E-STBD1D6RA91 191 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 H0YC42 278 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 H3BML4 177 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 GCM2O75603 506 aaPredicted RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 FAM107AO95990 144 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 PABPC4LP0CB38 370 aaKnown RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 POU3F2P20265 443 aaPredicted RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 IL11P20809 199 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 ADH6P28332 368 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 EIF1P41567 113 aaKnown RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 TPD52P55327 224 aaPredicted RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 CLDN20P56880 219 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 PCBP3P57721 371 aaKnown RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 SRYQ05066 204 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 RBBP4Q09028 425 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 LIN52Q52LA3 116 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 RNF220Q5VTB9 566 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 TMEM211Q6ICI0 200 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 RPTNQ6XPR3 784 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 GGNQ86UU5 652 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 GRAMD2AQ8IUY3 354 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 CLIP4Q8N3C7 705 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 FBXO27Q8NI29 283 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 PSMG3-AS1Q96PY0 264 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 GPATCH1Q9BRR8 931 aaKnown RBP20.17■□□□□ 0.82
PTCD3-203ENST00000409783 GID8Q9NWU2 228 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 IFT52Q9Y366 437 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 AP4B1Q9Y6B7 739 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 DOCK7Q96N67 2140 aa20.17■□□□□ 0.82
PTCD3-203ENST00000409783 ICE1Q9Y2F5 2266 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 PTPN13Q12923 2485 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 TOXO94900 526 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 PGCP20142 388 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 PRDX6P30041 224 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 PMPCAQ10713 525 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 CDSNQ15517 529 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 CYP51A1Q16850 503 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 NSUN5P2Q63ZY6 315 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 C8orf82Q6P1X6 216 aaPredicted RBP20.16■□□□□ 0.82
PTCD3-203ENST00000409783 C11orf65Q8NCR3 313 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 HIPK4Q8NE63 616 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 MRGPRX4Q96LA9 322 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 UCN2Q96RP3 112 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 SH3GL1Q99961 368 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 SPATA9Q9BWV2 254 aa20.16■□□□□ 0.82
PTCD3-203ENST00000409783 CD8B2A6NJW9 211 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 H0Y3Z8 333 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 AP3D1O14617 1153 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 AIM2O14862 343 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 SESN3P58005 492 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 RAC1P63000 192 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 LARS2Q15031 903 aaKnown RBP20.15■□□□□ 0.82
PTCD3-203ENST00000409783 ZNF311Q5JNZ3 666 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 FAM91A1Q658Y4 838 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 MRGPRGQ86SM5 289 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 ZNF808Q8N4W9 903 aaPredicted RBP20.15■□□□□ 0.82
PTCD3-203ENST00000409783 ST8SIA1Q92185 356 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 ADGRG7Q96K78 797 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 ZNF583Q96ND8 569 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 ACER3Q9NUN7 267 aa20.15■□□□□ 0.82
PTCD3-203ENST00000409783 MED12LQ86YW9 2145 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 FAAHO00519 579 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 AGAP20933 346 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 ELK4P28324 431 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 RYKP34925 604 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 PCGF2P35227 344 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 ACAA2P42765 397 aaKnown RBP20.14■□□□□ 0.81
PTCD3-203ENST00000409783 EPS8Q12929 822 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 ZSWIM7Q19AV6 140 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 CTU2Q2VPK5 515 aaKnown RBP20.14■□□□□ 0.81
PTCD3-203ENST00000409783 HACD2Q6Y1H2 254 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 COMTD1Q86VU5 262 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 LACC1Q8IV20 430 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 UBQLNLQ8IYU4 475 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 RND1Q92730 232 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 CMTM5Q96DZ9 223 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 LRRC37BQ96QE4 947 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 TRIB1Q96RU8 372 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 CALHM2Q9HA72 323 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 EFCAB1Q9HAE3 211 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 CMTM6Q9NX76 183 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 CLCF1Q9UBD9 225 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms