RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 EXOSC3Q9NQT5 275 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 DNAJB12Q9NXW2 375 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 GPC6Q9Y625 555 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 ICE1Q9Y2F5 2266 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 KDM4EB2RXH2 506 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 DNAJA2O60884 412 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 THBS1P07996 1170 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 GLI4P10075 376 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 PGCP20142 388 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 PSMA4P25789 261 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 RYKP34925 604 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 LARS2Q15031 903 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 SF3B4Q15427 424 aaKnown RBP eCLIP19.12■□□□□ 0.652e-7■■■■■ 32.9
TSPAN4-206ENST00000397408 ZNF808Q8N4W9 903 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 MEIOBQ8N635 442 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 C11orf65Q8NCR3 313 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 HIPK4Q8NE63 616 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 FBXO27Q8NI29 283 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 SH3GL1Q99961 368 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 RLIMQ9NVW2 624 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 ANGPT4Q9Y264 503 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 AP4B1Q9Y6B7 739 aa19.12■□□□□ 0.65
TSPAN4-206ENST00000397408 CDHR4A6H8M9 788 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 H0YC42 278 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 AIM2O14862 343 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 SHOX2O60902 331 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 ETS2P15036 469 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 AQP1P29972 269 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 TPD52P55327 224 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 CLDN20P56880 219 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 EEF1A1P68104 462 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 RBBP4Q09028 425 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 RNF220Q5VTB9 566 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 NET1Q7Z628 596 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 SERPINA11Q86U17 422 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 ZZZ3Q8IYH5 903 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 ZPLD1Q8TCW7 415 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 RND1Q92730 232 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 MRGPRX4Q96LA9 322 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 TMEM185BQ9H7F4 350 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 ADAM21Q9UKJ8 722 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF232Q9UNY5 417 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 IFT52Q9Y366 437 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 ARHGAP21Q5T5U3 1957 aa19.11■□□□□ 0.65
TSPAN4-206ENST00000397408 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 A1L4Q6 167 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 CLCA1A8K7I4 914 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 ADAM11O75078 769 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 EPPINO95925 133 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 FAM107AO95990 144 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 PABPC4LP0CB38 370 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 IL11P20809 199 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 ELK4P28324 431 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 ADH6P28332 368 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 SLC6A8P48029 635 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 SUCLG1P53597 346 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF311Q5JNZ3 666 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 NSUN5P2Q63ZY6 315 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 SEM1Q6ZVN7 128 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 KRT73Q86Y46 540 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 LACC1Q8IV20 430 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 OR10Q1Q8NGQ4 319 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF563Q8TA94 476 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 ST8SIA1Q92185 356 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 CMTM5Q96DZ9 223 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 SPATA9Q9BWV2 254 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 PIF1Q9H611 641 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 COQ3Q9NZJ6 369 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 STOML1Q9UBI4 398 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 KIAA1549Q9HCM3 1950 aa19.1■□□□□ 0.65
TSPAN4-206ENST00000397408 CD8B2A6NJW9 211 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 ETV2O00321 342 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 AP3D1O14617 1153 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 NTN1O95631 604 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 OPN1LWP04000 364 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 ME2P23368 584 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 CLDN15P56746 228 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 SESN3P58005 492 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 RAC1P63000 192 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 SLC25A53Q5H9E4 307 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 GKAP1Q5VSY0 366 aaPredicted RBP19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 GGNQ86UU5 652 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 CLIP4Q8N3C7 705 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 TMEM234Q8WY98 164 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 SDCCAG3Q96C92 435 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 ECSITQ9BQ95 431 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 SPATA5L1Q9BVQ7 753 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 RNF6Q9Y252 685 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 HECTD1Q9ULT8 2610 aa19.09■□□□□ 0.65
TSPAN4-206ENST00000397408 EIF1AYO14602 144 aaKnown RBP19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 DCTN3O75935 186 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 PRDX6P30041 224 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 PCGF2P35227 344 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 NUDT2P50583 147 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 GZMMP51124 257 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 EEFSECP57772 596 aaKnown RBP19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 ZSWIM7Q19AV6 140 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 RIPPLY2Q5TAB7 128 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 XKRXQ6PP77 449 aa19.08■□□□□ 0.65
TSPAN4-206ENST00000397408 PLXDC2Q6UX71 529 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms