RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 MOKQ9UQ07 419 aa13.48□□□□□ -0.25
PPARGC1B-203ENST00000394320 CORINQ9Y5Q5 1042 aa13.48□□□□□ -0.25
PPARGC1B-203ENST00000394320 SDK1Q7Z5N4 2213 aa13.48□□□□□ -0.25
PPARGC1B-203ENST00000394320 NAP1L6A6NFF2 107 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 TMEM225BP0DP42 221 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 FGL1Q08830 312 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 C17orf67Q0P5P2 114 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 GNMTQ14749 295 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 CCNJQ5T5M9 372 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 C1orf53Q5VUE5 145 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 SSX6Q7RTT6 188 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 DNAJA3Q96EY1 480 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 SYT3Q9BQG1 590 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 RANBP3Q9H6Z4 567 aaPredicted RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 GAREM1Q9H706 876 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 TMEM30AQ9NV96 361 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 HHLA2Q9UM44 414 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 ICKQ9UPZ9 632 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 ACP2P11117 423 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 CHMP24386 653 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 GNRHRP30968 328 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 ERVK-25P63136 954 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 PIP5KL1Q5T9C9 394 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 MRPL21Q7Z2W9 205 aaKnown RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 NECAB3Q96P71 396 aaPredicted RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 IL20RAQ9UHF4 553 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 LOC100509620A0A075B734 347 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 HCRTR1O43613 425 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 TRHRP34981 398 aaPredicted RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 EIF1P41567 113 aaKnown RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 RBPJQ06330 500 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 LSAMPQ13449 338 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 PTPRRQ15256 657 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 NTRK2Q16620 822 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 RNF175Q8N4F7 328 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 SDR9C7Q8NEX9 313 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 STACQ99469 402 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 WDR83Q9BRX9 315 aaKnown RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 TRBV5-4A0A0C4DH59 114 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 CREBL2O60519 120 aaPredicted RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 GABBR2O75899 941 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 PTTG1O95997 202 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 PTHP01270 115 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 CSF2P04141 144 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 OPRD1P41143 372 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 SSR4P51571 173 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 EPHA4P54764 986 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 EEF1A2Q05639 463 aaKnown RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 SHISA6Q6ZSJ9 500 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 NLGN4XQ8N0W4 816 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 SPAG16Q8N0X2 631 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 CHDHQ8NE62 594 aaPredicted RBP13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 COQ8AQ8NI60 647 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 GPR78Q96P69 363 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 ENKD1Q9H0I2 346 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 ENPP5Q9UJA9 477 aa13.47□□□□□ -0.25
PPARGC1B-203ENST00000394320 PRRT4C9JH25 899 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 ZNF16P17020 682 aaPredicted RBP13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 AGTR1P30556 359 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 PRSS3P35030 304 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 ATAD3CQ5T2N8 411 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 AWAT2Q6E213 333 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 RTL6Q6ICC9 239 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 BORAQ6PGQ7 559 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 SPRED1Q7Z699 444 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 SPARTQ8N0X7 666 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 OR5L1Q8NGL2 311 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 SLC37A2Q8TED4 501 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 CCNL2Q96S94 520 aaPredicted RBP13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 PBX4Q9BYU1 374 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 PCED1AQ9H1Q7 454 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 SYT4Q9H2B2 425 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 SLC6A20Q9NP91 592 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 PADI1Q9ULC6 663 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 RPH3AQ9Y2J0 694 aaPredicted RBP13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 TRAV6A0A075B6T7 132 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 A0A1B0GX78 115 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 LCKP06239 509 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 MSX1P28360 303 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 NCS1P62166 190 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 MLLT11Q13015 90 aaPredicted RBP13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 LMNTD1Q8N9Z9 388 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 ZNF740Q8NDX6 193 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 SLC2A12Q8TD20 617 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 HCAR1Q9BXC0 346 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 CACNG6Q9BXT2 260 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 GLIPR2Q9H4G4 154 aa13.46□□□□□ -0.25
PPARGC1B-203ENST00000394320 hCG_1807616A0A1W2PRN6 198 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 ZNF850A8MQ14 1090 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 M0R129 80 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 ALPLP05186 524 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 MTHFD2P13995 350 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 RAB3AP20336 220 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 BCL6P41182 706 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 SLC6A12P48065 614 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 DNASE1L3Q13609 305 aa13.46□□□□□ -0.26
PPARGC1B-203ENST00000394320 TP53I3Q53FA7 332 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms