RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
CLRN1-203ENST00000328863 TMEM185BQ9H7F4 350 aa13.37□□□□□ -0.27
CLRN1-203ENST00000328863 MTHFD2LQ9H903 347 aaPredicted RBP13.37□□□□□ -0.27
CLRN1-203ENST00000328863 KCNJ16Q9NPI9 418 aa13.37□□□□□ -0.27
CLRN1-203ENST00000328863 ZNF175Q9Y473 711 aa13.37□□□□□ -0.27
CLRN1-203ENST00000328863 CAPN7Q9Y6W3 813 aa13.37□□□□□ -0.27
CLRN1-203ENST00000328863 INTS1Q8N201 2190 aaKnown RBP13.37□□□□□ -0.27
CLRN1-203ENST00000328863 HCFC1P51610 2035 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 A0A0G2JPF8 293 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 HNRNPCL3B7ZW38 293 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 HNRNPCL1O60812 293 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 THBS1P07996 1170 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 HNRNPCL4P0DMR1 293 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 TMIGD3P0DMS9 266 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 BMP5P22003 454 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 PSMA4P25789 261 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 CEACAM8P31997 349 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 EIF1AXP47813 144 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 CLDN20P56880 219 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 CDSNQ15517 529 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 SGCBQ16585 318 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 ZSWIM7Q19AV6 140 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 TRMT5Q32P41 509 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 MMEL1Q495T6 779 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 RPS26P11Q5JNZ5 115 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 MRPL2Q5T653 305 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 PPP4R4Q6NUP7 873 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 HMGN2P46Q86SG4 172 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 GGNQ86UU5 652 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 ZNF440Q8IYI8 595 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 NAXEQ8NCW5 288 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 FBXO27Q8NI29 283 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 POC1BQ8TC44 478 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 GPR119Q8TDV5 335 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 KLHL15Q96M94 604 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 THUMPD3Q9BV44 507 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 SFXN3Q9BWM7 321 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 ARMC7Q9H6L4 198 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 SAR1AQ9NR31 198 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 SLAMF8Q9P0V8 285 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 ZNF629Q9UEG4 869 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 MCTS1Q9ULC4 181 aaKnown RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 ANGPT4Q9Y264 503 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 ZNF443Q9Y2A4 671 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 SPIN1Q9Y657 262 aaPredicted RBP13.36□□□□□ -0.27
CLRN1-203ENST00000328863 MED12LQ86YW9 2145 aa13.36□□□□□ -0.27
CLRN1-203ENST00000328863 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 KDM4EB2RXH2 506 aaPredicted RBP13.35□□□□□ -0.27
CLRN1-203ENST00000328863 ETV2O00321 342 aaPredicted RBP13.35□□□□□ -0.27
CLRN1-203ENST00000328863 HNRNPRO43390 633 aaKnown RBP13.35□□□□□ -0.27
CLRN1-203ENST00000328863 TOXO94900 526 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 ARAFP10398 606 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 COX6B1P14854 86 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 CTSSP25774 331 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 GRNP28799 593 aaKnown RBP13.35□□□□□ -0.27
CLRN1-203ENST00000328863 SLC7A1P30825 629 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 OPRM1P35372 400 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 ASCL1P50553 236 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 ZNF136P52737 540 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 KLF10Q13118 480 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 PON3Q15166 354 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 CYP51A1Q16850 503 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 SLC25A53Q5H9E4 307 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 KRT73Q86Y46 540 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 OR52P1PQ8NH57 321 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 OR2V1Q8NHB1 315 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 ANKRD27Q96NW4 1050 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 CGREF1Q99674 301 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 BCL2L10Q9HD36 194 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 DNAJB12Q9NXW2 375 aaKnown RBP13.35□□□□□ -0.27
CLRN1-203ENST00000328863 IFT52Q9Y366 437 aa13.35□□□□□ -0.27
CLRN1-203ENST00000328863 CLDN24A6NM45 220 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 TNFSF11O14788 317 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 MRASO14807 208 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 CCDC22O60826 627 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 DNAJA2O60884 412 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 RCBTB2O95199 551 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 SYNGR4O95473 234 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 NTN1O95631 604 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 IL18BPO95998 194 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 NUDT7P0C024 238 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 GPX2P18283 190 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 COL8A1P27658 744 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 LSP1P33241 339 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 SFTPDP35247 375 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 SUCLG1P53597 346 aaKnown RBP13.34□□□□□ -0.27
CLRN1-203ENST00000328863 CLDN15P56746 228 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 MTPNP58546 118 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 EEF1A1P68104 462 aaKnown RBP13.34□□□□□ -0.27
CLRN1-203ENST00000328863 CDK6Q00534 326 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 SCARB2Q14108 478 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 MAPK11Q15759 364 aa13.34□□□□□ -0.27
CLRN1-203ENST00000328863 TOMM34Q15785 309 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms