RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FAM221BA6H8Z2 402 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 VSTM2BA6NLU5 285 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF736B4DX44 427 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PEX14O75381 377 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 CLEC3AO75596 197 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 FBLP22087 321 aaKnown RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 NTHL1P78549 312 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PTPRRQ15256 657 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PKDCCQ504Y2 493 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 KCTD11Q693B1 232 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 BPHLQ86WA6 291 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 NLGN4XQ8N0W4 816 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 CDS1Q92903 461 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF419Q96HQ0 510 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 KLHL15Q96M94 604 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 SLC17A9Q9BYT1 436 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF254O75437 659 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 GASTP01350 101 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 SYPP08247 313 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF888P0CJ79 500 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 MAOAP21397 527 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 DPY19L2P1Q6NXN4 242 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 HORMAD2Q8N7B1 307 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZBTB44Q8NCP5 570 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 C10orf90Q96M02 699 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 KCNJ16Q9NPI9 418 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ADAMTS5Q9UNA0 930 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 CROCCQ5TZA2 2017 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TRBV4-1A0A0J9YWV2 114 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TP53P04637 393 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 CCNJQ5T5M9 372 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 TMEM164Q5U3C3 297 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 LSMEM1Q8N8F7 131 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF480Q8WV37 535 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 OR5B12Q96R08 314 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 EGLN3Q9H6Z9 239 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 MEGF11A6BM72 1044 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 CSF1P09603 554 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 GP2P55259 537 aaKnown RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 PRPS1P60891 318 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ASAH1Q13510 395 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 GRM7Q14831 915 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 NSDHLQ15738 373 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 VRK2Q86Y07 508 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF417Q8TAU3 575 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 BRIX1Q8TDN6 353 aaKnown RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 ASB11Q8WXH4 323 aa15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 METTL2AQ96IZ6 378 aaKnown RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 UHRF1Q96T88 793 aaPredicted RBP15.45■□□□□ 0.06
SH3RF1-201ENST00000284637 LCN10Q6JVE6 187 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 Q6ZSR9 355 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 SMAP2Q8WU79 429 aaPredicted RBP15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 RCE1Q9Y256 329 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 CCDC85CA6NKD9 419 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 PEX12O00623 359 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 JUNDP17535 347 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 FXYD4P59646 89 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 LCTLQ6UWM7 567 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 B3GLCTQ6Y288 498 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF619Q8N2I2 560 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 ST8SIA2Q92186 375 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 FOXJ1Q92949 421 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 DUS3LQ96G46 650 aaKnown RBP15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 NECTIN4Q96NY8 510 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 C1QTNF2Q9BXJ5 285 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 NUP188Q5SRE5 1749 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 MBLAC1A4D2B0 266 aaPredicted RBP15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 GABRPO00591 440 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 ADAM12O43184 909 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 SCO1O75880 301 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 CNOT4O95628 575 aaKnown RBP15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 CAV2P51636 162 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 RSU1Q15404 277 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 RAET1LQ5VY80 246 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 PAQR9Q6ZVX9 377 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF546Q86UE3 836 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 FUNDC1Q8IVP5 155 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 SLC7A13Q8TCU3 470 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 AP1S3Q96PC3 154 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 ZFYVE21Q9BQ24 234 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 SLC6A5Q9Y345 797 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 AKAIN1P0CW23 69 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 ACP2P11117 423 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 AOAHP28039 575 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 RAB33AQ14088 237 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 EIF2B1Q14232 305 aaKnown RBP15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 PGGHGQ32M88 737 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 GLYATL2Q8WU03 294 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 MR1Q95460 341 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 GPR174Q9BXC1 333 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 V9GY05 133 aa15.44■□□□□ 0.06
SH3RF1-201ENST00000284637 CRTAPO75718 401 aaPredicted RBP15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 BTG1P62324 171 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 SLC51BQ86UW2 128 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 CCDC71Q8IV32 467 aaPredicted RBP15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 TERB2Q8NHR7 220 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 SFXN5Q8TD22 340 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 ADAMTS14Q8WXS8 1223 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms