RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 DLEU7Q6UYE1 221 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 MCEMP1Q8IX19 187 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SECISBP2Q96T21 854 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 PRPF18Q99633 342 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 UBQLN4Q9NRR5 601 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 WBP11Q9Y2W2 641 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CAPN14A8MX76 684 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 EEF1E1-BLOC1S5C9J1V9 151 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 H0Y3Z8 333 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 EEF1E1O43324 174 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 VIMP08670 466 aaKnown RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 IDO1P14902 403 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CRYBA2P53672 197 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 DSCR4P56555 118 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SKP2Q13309 424 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 EFR3AQ14156 821 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 RCAN2Q14206 197 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ADRM1Q16186 407 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM44Q2T9K0 475 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 BNC2Q6ZN30 1099 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 C16orf62Q7Z3J2 963 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SPATA19Q7Z5L4 167 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ADGRE4PQ86SQ3 457 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 LILRA2Q8N149 483 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF808Q8N4W9 903 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ARFGAP2Q8N6H7 521 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 OR56A1Q8NGH5 318 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SARAFQ96BY9 339 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF317Q96PQ6 595 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 NEUROD4Q9HD90 331 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 B4GALT7Q9UBV7 327 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 WDR45Q9Y484 360 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ARID1AO14497 2285 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SCDO00767 359 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TPST2O60704 377 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 HPGDP15428 266 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 POU3F2P20265 443 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TNFRSF1BP20333 461 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 PGM1P36871 562 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ATP12AP54707 1039 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 FOXG1P55316 489 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 ARHGAP11BQ3KRB8 267 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM81Q6P7N7 255 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CROCCP2Q86T23 111 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CCDC103Q8IW40 242 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 WDFY1Q8IWB7 410 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CNEP1R1Q8N9A8 125 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 OR10D3Q8NH80 312 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 LILRB4Q8NHJ6 448 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 GOT1L1Q8NHS2 421 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-208ENST00000614678 RAB3IL1Q8TBN0 382 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SPDL1Q96EA4 605 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM19Q96HH6 336 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 STACQ99469 402 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 NMUR2Q9GZQ4 415 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 CLCF1Q9UBD9 225 aa5.12□□□□□ -1.59
CPNE3-208ENST00000614678 SMNDC1O75940 238 aaKnown RBP eCLIP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 IGHV3-9P01782 118 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 TFPTP0C1Z6 253 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 PRKCAP17252 672 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CASP6P55212 293 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 C17orf67Q0P5P2 114 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 DBPQ10586 325 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 QPRTQ15274 297 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 TMEM176BQ3YBM2 270 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 NHSL2Q5HYW2 709 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ALKBH2Q6NS38 261 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF550Q7Z398 422 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 BTLAQ7Z6A9 289 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 TREML1Q86YW5 311 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 RBM45Q8IUH3 476 aaKnown RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 LACC1Q8IV20 430 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SMYD1Q8NB12 490 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 B4GALNT2Q8NHY0 566 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ADGRG7Q96K78 797 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 TREX2Q9BQ50 279 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 C12orf49Q9H741 205 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 COQ10BQ9H8M1 238 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 BTNL2Q9UIR0 455 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 PCDHGB4Q9UN71 923 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 TRBV5-3A0A0A0MS03 114 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 OR14I1A6ND48 311 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SYNDIG1LA6NDD5 238 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SERINC4A6NH21 518 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 FIGNL2A6NMB9 653 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CLIC1O00299 241 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SIAH2O43255 324 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 KIAA0513O60268 411 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ANP32DO95626 131 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 UQCRC1P31930 480 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 CEACAM8P31997 349 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 KIR2DL2P43627 348 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 SESN3P58005 492 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 LSM11P83369 360 aaKnown RBP eCLIP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 RGNQ15493 299 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 EXOC3L2Q2M3D2 409 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 TBCELQ5QJ74 424 aa5.11□□□□□ -1.59
CPNE3-208ENST00000614678 MRPL2Q5T653 305 aaKnown RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF474Q6S9Z5 364 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-208ENST00000614678 ZNF836Q6ZNA1 936 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms