RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PHOSPHO1Q8TCT1 267 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 SLC41A3Q96GZ6 507 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ZNF559Q9BR84 538 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 YTHDF1Q9BYJ9 559 aaKnown RBP13.92□□□□□ -0.18
VRK3-207ENST00000594092 MRPS26Q9BYN8 205 aaKnown RBP13.92□□□□□ -0.18
VRK3-207ENST00000594092 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 P4HTMQ9NXG6 502 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 IL17BQ9UHF5 180 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 MGAT4BQ9UQ53 548 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 GMPPBQ9Y5P6 360 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 A0A1W2PQD3 144 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 TRAPPC13A5PLN9 417 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ALG1L2C9J202 215 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 OIP5O43482 229 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 FADS1O60427 444 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ADAP00813 363 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 GASTP01350 101 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 UBL4AP11441 157 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 NAGAP17050 411 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 RYKP34925 604 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 CLK3P49761 638 aaKnown RBP13.92□□□□□ -0.18
VRK3-207ENST00000594092 UGT2B15P54855 530 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 FBXW4P57775 412 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 EFR3AQ14156 821 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 TRAM2Q15035 370 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 KCTD21Q4G0X4 260 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 SLC22A8Q8TCC7 542 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 GTPBP3Q969Y2 492 aaKnown RBP13.92□□□□□ -0.18
VRK3-207ENST00000594092 RASL10BQ96S79 203 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 APOL4Q9BPW4 351 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ANKRD19PQ9H560 264 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 SMIM18P0DKX4 95 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 POU2F1P14859 743 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 EVI2BP34910 448 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 SKP2Q13309 424 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 RAPSNQ13702 412 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 MARCH3Q86UD3 253 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 NKAIN4Q8IVV8 208 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 ZNF440Q8IYI8 595 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 PARP8Q8N3A8 854 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 SLC15A4Q8N697 577 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 OR5M3Q8NGP4 307 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 ADAMTS17Q8TE56 1095 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 HGDQ93099 445 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 SLC38A4Q969I6 547 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 TBL1XR1Q9BZK7 514 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 NDRG4Q9ULP0 352 aaKnown RBP13.91□□□□□ -0.18
VRK3-207ENST00000594092 SLC7A7Q9UM01 511 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 CARD8Q9Y2G2 431 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 EXPH5Q8NEV8 1989 aa13.91□□□□□ -0.18
VRK3-207ENST00000594092 A0A087WUU8 490 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 GTPBP1O00178 669 aaKnown RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 DXOO77932 396 aaKnown RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 LYPD3O95274 346 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 NTN1O95631 604 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 FBXO45P0C2W1 286 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 ICAM2P13598 275 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 RPP38P78345 283 aaKnown RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 LSM11P83369 360 aaKnown RBP eCLIP13.9□□□□□ -0.18
VRK3-207ENST00000594092 IL5RAQ01344 420 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 Q0VFX4 171 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 CAMK2BQ13554 666 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TGIF1Q15583 401 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 RSPO4Q2I0M5 234 aaPredicted RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 RAB43Q86YS6 212 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TSPAN14Q8NG11 270 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 OR4K5Q8NGD3 323 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 NODALQ96S42 347 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 PITX2Q99697 317 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TRIM2Q9C040 744 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TMEM27Q9HBJ8 222 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 EXOSC3Q9NQT5 275 aaKnown RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 ADAM10O14672 748 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 ZNF264O43296 627 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 NDUFB5O43674 189 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 MAN1A2O60476 641 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 ITGA10O75578 1167 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
VRK3-207ENST00000594092 SLC34A2O95436 690 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 CLPTM1O96005 669 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 IFNGR2P38484 337 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TMED10P49755 219 aaKnown RBP13.9□□□□□ -0.18
VRK3-207ENST00000594092 ISL1P61371 349 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 ATP1A4Q13733 1029 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 FCRLBQ6BAA4 426 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 PGBD2Q6P3X8 592 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 ZNF613Q6PF04 617 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 KLHL17Q6TDP4 642 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 CBLN3Q6UW01 205 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 NUP54Q7Z3B4 507 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 HEATR5AQ86XA9 2040 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 LSMEM1Q8N8F7 131 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TOR1AIP2Q8NFQ8 470 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 GRHL3Q8TE85 626 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TTC9Q92623 222 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 TMCO6Q96DC7 493 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 HRASLS5Q96KN8 279 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 PRSS27Q9BQR3 290 aa13.9□□□□□ -0.18
VRK3-207ENST00000594092 DGCR6LQ9BY27 220 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms