RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	NPIPB8	E9PQR5	432 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	B4GALT2	O60909	372 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PPM1B	O75688	479 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	POP7	O75817	140 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ACADM	P11310	421 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	HNF1A	P20823	631 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CTSS	P25774	331 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SPDYE7P	Q495Y7	208 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TYW3	Q6IPR3	259 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	USP30	Q70CQ3	517 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LIX1L	Q8IVB5	337 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ADGRF3	Q8IZF5	1079 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SLC38A5	Q8WUX1	472 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C1GALT1C1	Q96EU7	318 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DTD2	Q96FN9	168 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LGR4	Q9BXB1	951 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RACGAP1	Q9H0H5	632 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PLCXD1	Q9NUJ7	323 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	BTNL2	Q9UIR0	455 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SPIN1	Q9Y657	262 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MN1	Q10571	1320 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		A0A1W2PQL4	384 aa	Predicted RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C5orf51	A6NDU8	294 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CENPX	A8MT69	81 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CASC3	O15234	703 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SLC31A1	O15431	190 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PRKY	O43930	277 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	AKR7A3	O95154	331 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SDC2	P34741	201 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SYPL1	Q16563	259 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PYDC2	Q56P42	97 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MEDAG	Q5VYS4	303 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	UBQLNL	Q8IYU4	475 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	BBS1	Q8NFJ9	593 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GPR32P1	Q8NGA4	272 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	OR52N2	Q8NGI0	321 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	DOK4	Q8TEW6	326 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RASSF5	Q8WWW0	418 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TMEM19	Q96HH6	336 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ST6GAL2	Q96JF0	529 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	NEU1	Q99519	415 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	KCNJ15	Q99712	375 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MFF	Q9GZY8	342 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	POLR2J3	Q9H1A7	115 aa	Known RBP	10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FZD3	Q9NPG1	666 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TAAR2	Q9P1P5	351 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TRPC4	Q9UBN4	977 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FTSJ1	Q9UET6	329 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PCDHB10	Q9UN67	800 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ENPP4	Q9Y6X5	453 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		V9GYH0	126 aa		10.82	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3D	A0A087WVF3	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3I	A0A087WXS9	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3E	A0A087X179	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3K	A0A087X1G2	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		A8MUA0	341 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3L	B9A6J9	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CPNE3	O75131	537 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3H	P0C7X1	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C1GALT1C1L	P0DN25	315 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	NR2F1	P10589	423 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CBL	P22681	906 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	THBS2	P35442	1172 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	SOX18	P35713	384 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LTBR	P36941	435 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TALDO1	P37837	337 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	XK	P51811	444 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MANF	P55145	182 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZNF91	Q05481	1191 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	IRF4	Q15306	451 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ANGPT1	Q15389	498 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CST6	Q15828	149 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZNF750	Q32MQ0	723 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ZNF658B	Q4V348	819 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FLYWCH1	Q4VC44	716 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3G	Q6DHY5	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3C	Q6IPX1	549 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TRIM40	Q6P9F5	258 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	BHLHB9	Q6PI77	547 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	VHLL	Q6RSH7	139 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ETV3L	Q6ZN32	361 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	LHFPL3	Q86UP9	236 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	RAB43	Q86YS6	212 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	BPIFC	Q8NFQ6	507 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	OR8J1	Q8NGP2	316 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	CREB3L4	Q8TEY5	395 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	GEMIN6	Q8WXD5	167 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	MARS2	Q96GW9	593 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	FOPNL	Q96NB1	174 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	NXF2	Q9GZY0	626 aa	Known RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	S1PR5	Q9H228	398 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	THAP10	Q9P2Z0	257 aa	Predicted RBP	10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	TAC3	Q9UHF0	121 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	ASF1A	Q9Y294	204 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063	PLXNA2	O75051	1894 aa		10.81	□□□□□ -0.68
CDK5RAP3-231	ENST00000584063		A0A1W2PS29	197 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms