RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 H0YIZ8 118 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 K7EP13 123 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TLR4O00206 839 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SLC28A1O00337 649 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 BTN3A3O00478 584 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF263O14978 683 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MDM4O15151 490 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 KLRC4O43908 158 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 EDF1O60869 148 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SCN2BO60939 215 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 CREG1O75629 220 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 KRT33AO76009 404 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 BEST1O76090 585 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 NTN1O95631 604 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C9P02748 559 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 AHSGP02765 367 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 RPLP2P05387 115 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C2P06681 752 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TPOP07202 933 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 OR52Z1P0C646 297 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 NBEAP1P0C6P0 100 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 METTL15P1P0C7V9 234 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PEPDP12955 493 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PAX1P15863 534 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HOXB6P17509 224 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HNRNPA2B1P22626 353 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 GABRR1P24046 479 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ITGA3P26006 1051 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HLA-DMAP28067 261 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 GTF2E2P29084 291 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 S100A11P31949 105 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 OTX1P32242 354 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MC5RP33032 325 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ARR3P36575 388 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 LIPAP38571 399 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TGM4P49221 684 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ACOT2P49753 483 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 LIMK2P53671 638 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ATP5IP56385 69 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 UBE2G2P60604 165 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PKIAP61925 76 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 NPRL3Q12980 569 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ECH1Q13011 328 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TSTA3Q13630 321 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 FHL1Q13642 323 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 BOP1Q14137 746 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ARHGEF7Q14155 803 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TRAM1Q15629 374 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ATP6AP1Q15904 470 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TSTQ16762 297 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HIST2H2ACQ16777 129 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 FAM187BQ17R55 369 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HFEQ30201 348 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HIKESHIQ53FT3 197 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 BEX5Q5H9J7 111 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C9orf152Q5JTZ5 239 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 CELF3Q5SZQ8 465 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C18orf63Q68DL7 685 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 REP15Q6BDI9 236 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 AWAT2Q6E213 333 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MRNIPQ6NTE8 343 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 LPCAT3Q6P1A2 487 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MED27Q6P2C8 311 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ULK3Q6PHR2 472 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SLC22A25Q6T423 547 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 AFTPHQ6ULP2 937 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TEX261Q6UWH6 196 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 GDPD4Q6W3E5 623 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM184AQ6ZMB5 413 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SLC29A4Q7RTT9 530 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MAVSQ7Z434 540 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 CARM1Q86X55 608 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ANGPTL5Q86XS5 388 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 RAB43Q86YS6 212 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 PLD3Q8IV08 490 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 CPOQ8IVL8 374 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ZBTB8OSQ8IWT0 167 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 CNTN4Q8IWV2 1026 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C8orf59Q8N0T1 100 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SCML4Q8N228 414 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MIER2Q8N344 545 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 C9orf62Q8N4C0 152 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 FAM89BQ8N5H3 189 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 COMMD1Q8N668 190 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 GDPD1Q8N9F7 314 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 DNAAF1Q8NEP3 725 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SDR42E1Q8WUS8 393 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SLC7A6Q92536 515 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 AP3S1Q92572 193 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HAS2Q92819 552 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 APBB2Q92870 758 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 FAM162AQ96A26 154 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MRGPRFQ96AM1 343 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 RGMAQ96B86 450 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 RASD2Q96D21 266 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SENP5Q96HI0 755 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 HYLS1Q96M11 299 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 GPR137Q96N19 417 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 MBOAT7Q96N66 472 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SFXN2Q96NB2 322 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms