RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 IFT88Q13099 833 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 ZNHIT3Q15649 155 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 METTL2BQ6P1Q9 378 aaKnown RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 GALNT5Q7Z7M9 940 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 WDR31Q8NA23 367 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 FBXO36Q8NEA4 188 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 OR4C3Q8NH37 302 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 RHEBL1Q8TAI7 183 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 SH3YL1Q96HL8 342 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 CDC42EP4Q9H3Q1 356 aaKnown RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 PLK3Q9H4B4 646 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 C3orf14Q9HBI5 128 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 SLC35C2Q9NQQ7 365 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 FARSBQ9NSD9 589 aaKnown RBP9.4□□□□□ -0.9
TMEM116-203ENST00000546537 GIMAP4Q9NUV9 329 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 MED29Q9NX70 200 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 MOKQ9UQ07 419 aa9.4□□□□□ -0.9
TMEM116-203ENST00000546537 GOLGA6L10A0A0M3HER8 536 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 GXYLT2A0PJZ3 443 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 KIF2AO00139 706 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 UPK1AO00322 258 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 PDE5AO76074 875 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 SLITRK5O94991 958 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 MSMBP08118 114 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 IL3P08700 152 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 IFNGR1P15260 489 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 ZNF75DP51815 510 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 CCNG1P51959 295 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 SLC25A3Q00325 362 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 SLC29A2Q14542 456 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 FASTKD3Q14CZ7 662 aaKnown RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 EFNB3Q15768 340 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 GLE1Q53GS7 698 aaKnown RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 SGO1Q5FBB7 561 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 SPATA19Q7Z5L4 167 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 MISPQ8IVT2 679 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 UBE2J2Q8N2K1 259 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 OR2L13Q8N349 312 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 TEX29Q8N6K0 151 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 C1orf52Q8N6N3 182 aaKnown RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 FBXO27Q8NI29 283 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 WDR60Q8WVS4 1066 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 LRRC37BQ96QE4 947 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 CPNE1Q99829 537 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 ELOVL6Q9H5J4 265 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 UNKLQ9H9P5 680 aaKnown RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 BRF2Q9HAW0 419 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 CA10Q9NS85 328 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 ASB6Q9NWX5 421 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 TXNDC16Q9P2K2 825 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 MCM8Q9UJA3 840 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 AMDHD2Q9Y303 409 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 TNPO3Q9Y5L0 923 aaKnown RBP9.39□□□□□ -0.91
TMEM116-203ENST00000546537 PTGDR2Q9Y5Y4 395 aa9.39□□□□□ -0.91
TMEM116-203ENST00000546537 A0A1W2PNR3 127 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 PDYNP01213 254 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 ITGA5P08648 1049 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 DDX5P17844 614 aaKnown RBP9.38□□□□□ -0.91
TMEM116-203ENST00000546537 GABRA3P34903 492 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 PRIM2P49643 509 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 FOXG1P55316 489 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-203ENST00000546537 ARL4CP56559 192 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 PDIA2Q13087 525 aaKnown RBP9.38□□□□□ -0.91
TMEM116-203ENST00000546537 TRAF3Q13114 568 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 HEPACAMQ14CZ8 416 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 TRADDQ15628 312 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 ADIPOQQ15848 244 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 GGTA1PQ4G0N0 100 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 C1QTNF12Q5T7M4 302 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 TMEM107Q6UX40 140 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 RAPH1Q70E73 1250 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 CMC1Q7Z7K0 106 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 C17orf78Q8N4C9 275 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 ATP6V1C2Q8NEY4 427 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 PIK3R3Q92569 461 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 MRGPRX4Q96LA9 322 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 SLC6A7Q99884 636 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 SHCBP1LQ9BZQ2 653 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 LPAR2Q9HBW0 351 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 SLC17A5Q9NRA2 495 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 DDX18Q9NVP1 670 aaKnown RBP9.38□□□□□ -0.91
TMEM116-203ENST00000546537 NMRK1Q9NWW6 199 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 MALT1Q9UDY8 824 aa9.38□□□□□ -0.91
TMEM116-203ENST00000546537 FBXO9Q9UK97 447 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-203ENST00000546537 LOC105371242A0A075B767 164 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 IGKV3D-15A0A087WSY6 115 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 A0A1W2PQD3 144 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 CCDC189A1A4V9 331 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 TTC36A6NLP5 189 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 POM121CA8CG34 1229 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 PDLIM1O00151 329 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 PNPP00491 289 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 AVPP01185 164 aa9.37□□□□□ -0.91
TMEM116-203ENST00000546537 JUNP05412 331 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms