RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 PIF1Q9H611 641 aa17.41■□□□□ 0.38
COPS7A-205ENST00000536872 CACYBPQ9HB71 228 aaKnown RBP17.41■□□□□ 0.38
COPS7A-205ENST00000536872 A4GALTQ9NPC4 353 aa17.41■□□□□ 0.38
COPS7A-205ENST00000536872 A0A0G2JPF8 293 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 WIPF3A6NGB9 483 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 KDM4EB2RXH2 506 aaPredicted RBP17.4■□□□□ 0.38
COPS7A-205ENST00000536872 HNRNPCL2B2RXH8 293 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 HNRNPCL3B7ZW38 293 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 SEC14L5O43304 696 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 HNRNPCL1O60812 293 aaKnown RBP17.4■□□□□ 0.38
COPS7A-205ENST00000536872 DBIP07108 87 aaKnown RBP17.4■□□□□ 0.38
COPS7A-205ENST00000536872 HNRNPCL4P0DMR1 293 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 GLI4P10075 376 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 GPX2P18283 190 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 LHX2P50458 406 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 SKP2Q13309 424 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 PLPPR5Q32ZL2 321 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 VRK2Q86Y07 508 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 ATP6V1C2Q8NEY4 427 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 TOR1AIP2Q8NFQ8 470 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 OR52P1PQ8NH57 321 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 FBXO27Q8NI29 283 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 WDR60Q8WVS4 1066 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 RNF145Q96MT1 663 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 TTYH2Q9BSA4 534 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 PRDM14Q9GZV8 571 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 SLC35A3Q9Y2D2 325 aa17.4■□□□□ 0.38
COPS7A-205ENST00000536872 H0YC42 278 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 HOXD4P09016 255 aaPredicted RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 BMP2P12643 396 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 PEPDP12955 493 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 COX4I1P13073 169 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CPN1P15169 458 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 PGM1P36871 562 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 ADH7P40394 386 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 TPD52P55327 224 aaPredicted RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CDK6Q00534 326 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CBFBQ13951 182 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CYP51A1Q16850 503 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 TRMT5Q32P41 509 aaKnown RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 ACSF3Q4G176 576 aaPredicted RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 AP1ARQ63HQ0 302 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 PLXDC2Q6UX71 529 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CHMP1BQ7LBR1 199 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 TREML1Q86YW5 311 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CCDC71Q8IV32 467 aaPredicted RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 PCYOX1LQ8NBM8 494 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 POC1BQ8TC44 478 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 PHF10Q8WUB8 498 aaKnown RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 ITLN2Q8WWU7 325 aaPredicted RBP17.39■□□□□ 0.37
COPS7A-205ENST00000536872 RND1Q92730 232 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 ZBTB8AQ96BR9 441 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 ZNF524Q96C55 264 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 SDCCAG3Q96C92 435 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 LRRC58Q96CX6 371 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 RCN3Q96D15 328 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 TUBA1CQ9BQE3 449 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 CCDC106Q9BWC9 280 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 TMEM185BQ9H7F4 350 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 ZNF232Q9UNY5 417 aa17.39■□□□□ 0.37
COPS7A-205ENST00000536872 PHF3Q92576 2039 aaKnown RBP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 BBIP1A8MTZ0 92 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 AIM2O14862 343 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 SLC22A2O15244 555 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 PGM3O95394 542 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 LINGO3P0C6S8 592 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 ARAFP10398 606 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 ZNF708P17019 499 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 SLC6A2P23975 617 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 SUCLG1P53597 346 aaKnown RBP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 SUMO3P55854 103 aaPredicted RBP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 CLDN18P56856 261 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 CLDN20P56880 219 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 FOXF1Q12946 379 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 SCARB2Q14108 478 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 QPRTQ15274 297 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 SF3B4Q15427 424 aaKnown RBP eCLIP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 TMEM44Q2T9K0 475 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 RABL3Q5HYI8 236 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 MRPL2Q5T653 305 aaKnown RBP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 NANOGP8Q6NSW7 305 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 REEP3Q6NUK4 255 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 GTPBP8Q8N3Z3 284 aaPredicted RBP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 MEIOBQ8N635 442 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 OR10A6Q8NH74 314 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 RP9Q8TA86 221 aaKnown RBP17.38■□□□□ 0.37
COPS7A-205ENST00000536872 ZNF563Q8TA94 476 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 PMM1Q92871 262 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 NANOGQ9H9S0 305 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 RLIMQ9NVW2 624 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 GID8Q9NWU2 228 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 FAM53CQ9NYF3 392 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 COL12A1Q99715 3063 aa17.38■□□□□ 0.37
COPS7A-205ENST00000536872 UTP20O75691 2785 aaKnown RBP17.37■□□□□ 0.37
COPS7A-205ENST00000536872 LINC01387J3KSC0 135 aa17.37■□□□□ 0.37
COPS7A-205ENST00000536872 PGCP20142 388 aa17.37■□□□□ 0.37
COPS7A-205ENST00000536872 IL11P20809 199 aa17.37■□□□□ 0.37
COPS7A-205ENST00000536872 AQP1P29972 269 aa17.37■□□□□ 0.37
COPS7A-205ENST00000536872 PTGER4P35408 488 aa17.37■□□□□ 0.37
COPS7A-205ENST00000536872 LARS2Q15031 903 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms