RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SLC38A5Q8WUX1 472 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 SDCCAG3Q96C92 435 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 ARSGQ96EG1 525 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 CGREF1Q99674 301 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 ELAC2Q9BQ52 826 aaKnown RBP11.32□□□□□ -0.6
CCNC-216ENST00000523961 QRSL1Q9H0R6 528 aaKnown RBP11.32□□□□□ -0.6
CCNC-216ENST00000523961 RUBCNLQ9H714 662 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 CALHM2Q9HA72 323 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 CACYBPQ9HB71 228 aaKnown RBP11.32□□□□□ -0.6
CCNC-216ENST00000523961 A4GALTQ9NPC4 353 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 PLEKHB1Q9UF11 243 aaPredicted RBP11.32□□□□□ -0.6
CCNC-216ENST00000523961 ZNF337Q9Y3M9 751 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 AP4B1Q9Y6B7 739 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 PTPN13Q12923 2485 aa11.32□□□□□ -0.6
CCNC-216ENST00000523961 PCNX3Q9H6A9 2034 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 NCOA6Q14686 2063 aaPredicted RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 A0A0G2JPF8 293 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 GMNCA6NCL1 334 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 BBIP1A8MTZ0 92 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 HNRNPCL2B2RXH8 293 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 HNRNPCL3B7ZW38 293 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 H3BML4 177 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 HNRNPCL1O60812 293 aaKnown RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 CLDN14O95500 239 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 CLDN1O95832 211 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 LINGO3P0C6S8 592 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 UBTFL6P0CB48 400 aaPredicted RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 HNRNPCL4P0DMR1 293 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 IL7RP16871 459 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 RPS4Y1P22090 263 aaKnown RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 ADH6P28332 368 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 CHRNB4P30926 498 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 TIMP3P35625 211 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 PGM1P36871 562 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 GYS2P54840 703 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 GNGT1P63211 74 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 MMEL1Q495T6 779 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 RUNDC3AQ59EK9 446 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 CHMP1BQ7LBR1 199 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 CPLX4Q7Z7G2 160 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 FAM71CQ8NEG0 241 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 CA5BP1Q8WTZ4 195 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 TMEM19Q96HH6 336 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 RNF145Q96MT1 663 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 ANKRD27Q96NW4 1050 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 TRIB1Q96RU8 372 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 TREX2Q9BQ50 279 aaPredicted RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 KLHDC3Q9BQ90 382 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 TUBA1CQ9BQE3 449 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 CPPED1Q9BRF8 314 aaPredicted RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 FAM107BQ9H098 131 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 BCL2L10Q9HD36 194 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 RNF6Q9Y252 685 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 GPC6Q9Y625 555 aaPredicted RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 PHF3Q92576 2039 aaKnown RBP11.31□□□□□ -0.6
CCNC-216ENST00000523961 DSPPQ9NZW4 1301 aa11.31□□□□□ -0.6
CCNC-216ENST00000523961 HSPB2A8KAH6 182 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 SHISA8B8ZZ34 492 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 C5orf58C9J3I9 102 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 FBP2O00757 339 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 DNAJA2O60884 412 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 NPPAP01160 153 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 IL2RAP01589 272 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 NUDT7P0C024 238 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 ARAFP10398 606 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 GP1BBP13224 206 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 NID1P14543 1247 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 PGCP20142 388 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 DRD4P21917 467 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 ME2P23368 584 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 PSMA4P25789 261 aaKnown RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 ELK4P28324 431 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 RPS3AP61247 264 aaKnown RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 RAC1P63000 192 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 FOXF1Q12946 379 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 CYLC2Q14093 348 aaPredicted RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 LARS2Q15031 903 aaKnown RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 HSPB2Q16082 182 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 TRMT5Q32P41 509 aaKnown RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 SEM1Q6ZVN7 128 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 HMGN2P46Q86SG4 172 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 ADGRE4PQ86SQ3 457 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 SNX32Q86XE0 403 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 CCDC71Q8IV32 467 aaPredicted RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 OR52P1PQ8NH57 321 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 BBS10Q8TAM1 723 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 POC1BQ8TC44 478 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 TMEM234Q8WY98 164 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 ST8SIA1Q92185 356 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 SMPDL3BQ92485 455 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 MAL2Q969L2 176 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 MRGPRX4Q96LA9 322 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms