RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 THBS1P07996 1170 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 LINGO3P0C6S8 592 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 HNRNPCL4P0DMR1 293 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 GLI4P10075 376 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 PGCP20142 388 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 ELK4P28324 431 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 CHRNB4P30926 498 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 TIMP3P35625 211 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 PGM1P36871 562 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 SLC6A8P48029 635 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 CLDN18P56856 261 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 NUP107P57740 925 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 SKP2Q13309 424 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 NFYCQ13952 458 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 MAPK14Q16539 360 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 RUNDC3AQ59EK9 446 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 CBLN3Q6UW01 205 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 ARSKQ6UWY0 536 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 MARVELD2Q8N4S9 558 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 TMCO5AQ8N6Q1 288 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 BBS10Q8TAM1 723 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 WDR60Q8WVS4 1066 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 TMEM234Q8WY98 164 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 ST8SIA1Q92185 356 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 TMEM19Q96HH6 336 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 MRGPRX4Q96LA9 322 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 ANKRD27Q96NW4 1050 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 CGREF1Q99674 301 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 TREX2Q9BQ50 279 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-225ENST00000523950 CPPED1Q9BRF8 314 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-225ENST00000523950 TMEM38AQ9H6F2 299 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 BCL2L10Q9HD36 194 aa11.35□□□□□ -0.59
VEGFA-225ENST00000523950 CENPVL1A0A0U1RR11 272 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 MBD3L4A6NDZ8 208 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 MBD3L3A6NE82 208 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 MBD3L5A6NJ08 208 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 HSPB2A8KAH6 182 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 C5orf58C9J3I9 102 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 GMFGO60234 142 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 CLDN14O95500 239 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ARAFP10398 606 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 NID1P14543 1247 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 CD1EP15812 388 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 IL7RP16871 459 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 PRKCAP17252 672 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 TCEA1P23193 301 aaKnown RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 PSMA4P25789 261 aaKnown RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 DLX5P56178 289 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 RPS3AP61247 264 aaKnown RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 RAC1P63000 192 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 KCNJ10P78508 379 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 RBBP4Q09028 425 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 PMPCAQ10713 525 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 MAPK11Q15759 364 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 HSPB2Q16082 182 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 TRMT5Q32P41 509 aaKnown RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 LIN52Q52LA3 116 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 CHMP1BQ7LBR1 199 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 OLIG3Q7RTU3 272 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 CPLX4Q7Z7G2 160 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ADGRE4PQ86SQ3 457 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 RETREG3Q86VR2 466 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ZNF440Q8IYI8 595 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 PCYOX1LQ8NBM8 494 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 MBD3L2Q8NHZ7 208 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 GPR119Q8TDV5 335 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ZFP3Q96NJ6 502 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 SH3GL1Q99961 368 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ELAC2Q9BQ52 826 aaKnown RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 PAQR5Q9NXK6 330 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 PLEKHB1Q9UF11 243 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-225ENST00000523950 IFT52Q9Y366 437 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 ZNF337Q9Y3M9 751 aa11.34□□□□□ -0.59
VEGFA-225ENST00000523950 HEATR5AQ86XA9 2040 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 DOPEY2Q9Y3R5 2298 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 GJE1A6NN92 205 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 H3BML4 177 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 FBP2O00757 339 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 OIP5O43482 229 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SNX3O60493 162 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 NTN1O95631 604 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 UBTFL6P0CB48 400 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-225ENST00000523950 GP1BBP13224 206 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 UQCRBP14927 111 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 ETS2P15036 469 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 DRD4P21917 467 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 ME2P23368 584 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 STARP49675 285 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 CCR4P51679 360 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SEC24CP53992 1094 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 EEF1A1P68104 462 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms