RNA–Protein interactions for RNA: ENST00000507692.5

SNHG4-205, Transcript of small nucleolar RNA host gene 4, human

TSL 5

Gene SNHG4, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-205	ENST00000507692	FUNDC1	Q8IVP5	155 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	UBQLNL	Q8IYU4	475 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF619	Q8N2I2	560 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TMCO5A	Q8N6Q1	288 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TOR1AIP2	Q8NFQ8	470 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TNIP2	Q8NFZ5	429 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	OR5M1	Q8NGP8	315 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	RFWD2	Q8NHY2	731 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	PNPT1	Q8TCS8	783 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SMPDL3B	Q92485	455 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	GTF2H4	Q92759	462 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	PMM1	Q92871	262 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	VPS33A	Q96AX1	596 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	LRRC46	Q96FV0	321 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	THOC1	Q96FV9	657 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZFP3	Q96NJ6	502 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TRNT1	Q96Q11	434 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	UCN2	Q96RP3	112 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TM9SF2	Q99805	663 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TUBA1C	Q9BQE3	449 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SAP130	Q9H0E3	1048 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	RAD21L1	Q9H4I0	556 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	TPT1P8	Q9HAU6	139 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SLC6A13	Q9NSD5	602 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	MRGBP	Q9NV56	204 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	MED17	Q9NVC6	651 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	THUMPD1	Q9NXG2	353 aa	Known RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CALML5	Q9NZT1	146 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	P2RX2	Q9UBL9	471 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	SLC35A3	Q9Y2D2	325 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	CARD8	Q9Y2G2	431 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF337	Q9Y3M9	751 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	L3MBTL1	Q9Y468	752 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	PCDHB14	Q9Y5E9	798 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	GPC6	Q9Y625	555 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	AP4B1	Q9Y6B7	739 aa		4.54	□□□□□ -1.68
SNHG4-205	ENST00000507692	FLNA	P21333	2647 aa	Known RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692		A0A1W2PP18	115 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	PRAMEF27	A3QJZ7	478 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	NKX2-6	A6NCS4	301 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	SLC22A20	A6NK97	555 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	GJE1	A6NN92	205 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	EVPLL	A8MZ36	301 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	KDM4E	B2RXH2	506 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	SHISA8	B8ZZ34	492 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	CLIC1	O00299	241 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	EIF1AY	O14602	144 aa	Known RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ANGPT2	O15123	496 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	OIP5	O43482	229 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	CYP7B1	O75881	506 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	TOX	O94900	526 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	RCBTB2	O95199	551 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	H6PD	O95479	791 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	IL18BP	O95998	194 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	C1QC	P02747	245 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	LINGO3	P0C6S8	592 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	UBTFL6	P0CB48	400 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	FCGR2A	P12318	317 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ETFA	P13804	333 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	COX6B1	P14854	86 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	IL7R	P16871	459 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	PRKCA	P17252	672 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	PGC	P20142	388 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	BMP5	P22003	454 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	PPIB	P23284	216 aa	Known RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	CTSS	P25774	331 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ELK4	P28324	431 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ADH6	P28332	368 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	OPRM1	P35372	400 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	PGM1	P36871	562 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	MDH1	P40925	334 aa	Known RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ASCL1	P50553	236 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	RNF144A	P50876	292 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF136	P52737	540 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ARFIP2	P53365	341 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	SUCLG1	P53597	346 aa	Known RBP	4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	CRISP3	P54108	245 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	CLDN20	P56880	219 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	RAC1	P63000	192 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	KCNJ10	P78508	379 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	GUCY1A3	Q02108	690 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	CHRNE	Q04844	493 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	TFF3	Q07654	80 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	FOXF1	Q12946	379 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	FADD	Q13158	208 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	SKP2	Q13309	424 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	GNA13	Q14344	377 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	SGCB	Q16585	318 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	NDUFAF6	Q330K2	333 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	GTDC1	Q4AE62	458 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	SLC25A53	Q5H9E4	307 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	COX20	Q5RI15	118 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	PDSS1	Q5T2R2	415 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	LRIF1	Q5T3J3	769 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	METTL21C	Q5VZV1	264 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	AP1AR	Q63HQ0	302 aa		4.53	□□□□□ -1.68
SNHG4-205	ENST00000507692	ZNF787	Q6DD87	383 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms