RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PDIA5Q14554 519 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 CCDC57Q2TAC2 916 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 USH1GQ495M9 461 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 ANXA8L1Q5VT79 327 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 AP1ARQ63HQ0 302 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 EFCAB13Q8IY85 973 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 CENPLQ8N0S6 344 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 SPERTQ8NA61 448 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 BBOF1Q8ND07 529 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 STKLD1Q8NE28 680 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 OR8K3Q8NH51 312 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 PEX13Q92968 403 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 NT5C3BQ969T7 300 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 FAM46BQ96A09 425 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 CXorf58Q96LI9 332 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 ZNF607Q96SK3 696 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 SH3GL3Q99963 347 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 MAPKAP1Q9BPZ7 522 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 JPH2Q9BR39 696 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 PAXXQ9BUH6 204 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 NTMT1Q9BV86 223 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 NMNAT2Q9BZQ4 307 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 IQCGQ9H095 443 aaKnown RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 Q9HAA7 133 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 VAT1LQ9HCJ6 419 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 VNN3Q9NY84 501 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 ATXN10Q9UBB4 475 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 PRO0461Q9UI25 63 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 MRTO4Q9UKD2 239 aaKnown RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 N6AMT1Q9Y5N5 214 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 NCOA3Q9Y6Q9 1424 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 ATRXP46100 2492 aa4.01□□□□□ -1.77
SF3B1-212ENST00000496458 KTN1Q86UP2 1357 aaKnown RBP4.01□□□□□ -1.77
SF3B1-212ENST00000496458 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 FAM220BPB1ANY3 271 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 K7ERI5 159 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 DNALI1O14645 258 aaPredicted RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 PRRG1O14668 218 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 TNFSF11O14788 317 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 B4GALT2O60909 372 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 VPS26AO75436 327 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 STAMBPO95630 424 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 CT45A8P0DMV1 189 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 CT45A9P0DMV2 189 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 RPA2P15927 270 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 RFC2P35250 354 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 CCT6AP40227 531 aaKnown RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 ARHGDIAP52565 204 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 HADHBP55084 474 aaKnown RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 HSF2Q03933 536 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 SPAG1Q07617 926 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 SLC10A1Q14973 349 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 CT45A2Q5DJT8 189 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 FBXO48Q5FWF7 155 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 LDLRAP1Q5SW96 308 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 DDI2Q5TDH0 399 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 PRAMEF20Q5VT98 475 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 PRAMEF7Q5VXH5 474 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 NCR3LG1Q68D85 454 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 PMF1Q6P1K2 205 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 LUZP1Q86V48 1076 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 GRAMD2AQ8IUY3 354 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 BCORP1Q8N888 145 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 OR52J3Q8NH60 311 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 RLN3Q8WXF3 142 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 CRYGNQ8WXF5 182 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 HAS2Q92819 552 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 DHTKD1Q96HY7 919 aaPredicted RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 ZNF396Q96N95 335 aaPredicted RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 COQ7Q99807 217 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 LZTS2Q9BRK4 669 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 MTG1Q9BT17 334 aaPredicted RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 FTHL17Q9BXU8 183 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 SLC7A5P2Q9GIP4 190 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 TMEM231Q9H6L2 316 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 ADGRL4Q9HBW9 690 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 HYPKQ9NX55 129 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 SENP1Q9P0U3 644 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 CHRNA9Q9UGM1 479 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 MRPS2Q9Y399 296 aaKnown RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 AP4B1Q9Y6B7 739 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 V9GYY5 206 aaPredicted RBP4□□□□□ -1.77
SF3B1-212ENST00000496458 ADGRL3Q9HAR2 1447 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 ASXL1Q8IXJ9 1541 aa4□□□□□ -1.77
SF3B1-212ENST00000496458 RGPD8O14715 1765 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-212ENST00000496458 LAMC1P11047 1609 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 NALCNQ8IZF0 1738 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ADGRB1O14514 1584 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 FAM135BQ49AJ0 1406 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 TRABD2BA6NFA1 517 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 SLC15A5A6NIM6 579 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 SLC28A1O00337 649 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 ASNSP08243 561 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 MBL2P11226 248 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-212ENST00000496458 RALAP11233 206 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 U2AF2P26368 475 aaKnown RBP eCLIP3.99□□□□□ -1.77
SF3B1-212ENST00000496458 HTR2AP28223 471 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 PRDX6P30041 224 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 RGRP47804 291 aa3.99□□□□□ -1.77
SF3B1-212ENST00000496458 AIF1P55008 147 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms