RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SDHAF2Q9NX18 166 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PRELID3BQ9Y3B1 194 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 COL1A1P02452 1464 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ATP6V1G2-DDX39BF2Z307 99 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 GABARAPH6UMI1 98 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 UBFD1O14562 309 aaKnown RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 TO15178 435 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 FOXD2O60548 495 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PLATP00750 562 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ALDOBP05062 364 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 RFX2P48378 723 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 RABGGTBP53611 331 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MADCAM1Q13477 382 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 RBM39Q14498 530 aaKnown RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PPA1Q15181 289 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 RPS27LQ71UM5 84 aaKnown RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 TMEM200AQ86VY9 491 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ZFPM2Q8WW38 1151 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 TTC9Q92623 222 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MAL2Q969L2 176 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 LURAP1Q96LR2 239 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SAMD8Q96LT4 415 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SLC6A7Q99884 636 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 NOX1Q9Y5S8 564 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 KDM4FA0A1W2PPD8 638 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 CD8B2A6NJW9 211 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 D6RAR5 112 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 NFKBIEO00221 500 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PPP1R2P9O14990 202 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 CD8BP10966 210 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PCSK6P29122 969 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 S100A7P31151 101 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 HOXA9P31269 272 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 RAB1AP62820 205 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 KCNJ10P78508 379 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MALLQ13021 153 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SGCBQ16585 318 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MANEAQ5SRI9 462 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 OVCH1Q7RTY7 1134 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 TCTE3Q8IZS6 198 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 OR52E2Q8NGJ4 325 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 OR9A4Q8NGU2 314 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 C3orf30Q96M34 536 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MICU1Q9BPX6 476 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 CWH43Q9H720 699 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SEMA4GQ9NTN9 838 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 KLRF1Q9NZS2 232 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PRKAB1Q9Y478 270 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 PEX12O00623 359 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ONECUT3O60422 494 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 DFFBO76075 338 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 LY86O95711 162 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ELK1P19419 428 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 GDNFP39905 211 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 CD79BP40259 229 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 RPL34P49207 117 aaKnown RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 AKR1C2P52895 323 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SPOCK1Q08629 439 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ACSM1Q08AH1 577 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 OLIG2Q13516 323 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SF3B4Q15427 424 aaKnown RBP eCLIP5.78□□□□□ -1.482e-8■■■■■ 30
PRPF4B-205ENST00000480058 ADPRMQ3LIE5 342 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MISPQ8IVT2 679 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SLC35F2Q8IXU6 374 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 OR1M1Q8NGA1 313 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 OR4K13Q8NH42 304 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MARC2Q969Z3 335 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 SLC25A44Q96H78 314 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 C10orf90Q96M02 699 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 TSSK2Q96PF2 358 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 DOK1Q99704 481 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 ZNF337Q9Y3M9 751 aa5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 MED1Q15648 1581 aaPredicted RBP5.78□□□□□ -1.48
PRPF4B-205ENST00000480058 KCPQ6ZWJ8 1503 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 DNAJC25-GNG10A0A024R161 153 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 TRABD2BA6NFA1 517 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 F10P00742 488 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 INHAP05111 366 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 DCNP07585 359 aaKnown RBP5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 POLR2CP19387 275 aaPredicted RBP5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 CDKN1CP49918 316 aaPredicted RBP5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 RPP30P78346 268 aaKnown RBP5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 PDE7AQ13946 482 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 H3F3CQ6NXT2 135 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 SBSNQ6UWP8 590 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 USP51Q70EK9 711 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 FOXRED2Q8IWF2 684 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 LAS2Q8IYD9 372 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 C2orf73Q8N5S3 287 aaPredicted RBP5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 ANKRD53Q8N9V6 530 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 BCL7CQ8WUZ0 217 aaPredicted RBP5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 BORCS8Q96FH0 119 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 SHDQ96IW2 340 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 SLC19A3Q9BZV2 496 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 DNAJC5Q9H3Z4 198 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 RCE1Q9Y256 329 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 KCNK6Q9Y257 313 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 C20orf202A1L168 122 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 BTBD17A6NE02 478 aa5.77□□□□□ -1.49
PRPF4B-205ENST00000480058 GABRR3A8MPY1 467 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms