RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 M1APQ8TC57 530 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 PHOSPHO1Q8TCT1 267 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 TP53INP1Q96A56 240 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 COG8Q96MW5 612 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 GALNT9Q9HCQ5 603 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 UBQLN4Q9NRR5 601 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 ACER3Q9NUN7 267 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 DNAJB12Q9NXW2 375 aaKnown RBP16.58■□□□□ 0.25
ATG4B-217ENST00000475693 SLC9A8Q9Y2E8 581 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 CARD8Q9Y2G2 431 aa16.58■□□□□ 0.25
ATG4B-217ENST00000475693 APC2O95996 2303 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 SYNDIG1LA6NDD5 238 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 SERINC4A6NH21 518 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 AP3D1O14617 1153 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 DXOO77932 396 aaKnown RBP16.58■□□□□ 0.24
ATG4B-217ENST00000475693 THBS1P07996 1170 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 HPGDP15428 266 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 HTR2AP28223 471 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 NRG3P56975 720 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 EXOC3L2Q2M3D2 409 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 IL20RBQ6UXL0 311 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 OR10G3Q8NGC4 313 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 MAGEE2Q8TD90 523 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-217ENST00000475693 PIP5K1AQ99755 562 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 NMNAT1Q9HAN9 279 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-217ENST00000475693 POLE3Q9NRF9 147 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 FAM32AQ9Y421 112 aaKnown RBP16.58■□□□□ 0.24
ATG4B-217ENST00000475693 PCDHGA10Q9Y5H3 936 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 HRH3Q9Y5N1 445 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 LYVE1Q9Y5Y7 322 aa16.58■□□□□ 0.24
ATG4B-217ENST00000475693 TRBV4-1A0A0J9YWV2 114 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 TTC36A6NLP5 189 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 B4DXG7 233 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 G3V2T6 193 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 WISP1O95388 367 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 INHBBP09529 407 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 JUNBP17275 347 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 ADARB1P78563 741 aaKnown RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 FGFBP1Q14512 234 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 RAB39AQ14964 217 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 INPP5JQ15735 1006 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 ENTPD8Q5MY95 495 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 C17orf47Q8NEP4 570 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 GRHL3Q8TE85 626 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 THOC3Q96J01 351 aaKnown RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 MCHR1Q99705 422 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 CACYBPQ9HB71 228 aaKnown RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 EML6Q6ZMW3 1958 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 TNFRSF11BO00300 401 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 PPM1BO75688 479 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 SOX30O94993 753 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 ATE1O95260 518 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 HPP00738 406 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 CSTAP01040 98 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 CD82P27701 267 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 CD97P48960 835 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 TMBIM6P55061 237 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 CLN3Q13286 438 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 KCNAB2Q13303 367 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 PMS2P3Q13401 168 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 TUBA3CQ13748 450 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 SEC23BQ15437 767 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 ZNF605Q86T29 641 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 OR8K3Q8NH51 312 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 PSMF1Q92530 271 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 KIAA1143Q96AT1 154 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 REEP1Q9H902 201 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 PDP1Q9P0J1 537 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-217ENST00000475693 WASF3Q9UPY6 502 aa16.57■□□□□ 0.24
ATG4B-217ENST00000475693 A0A1W2PQ72 361 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 A6NL46 340 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 SYT5O00445 386 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 SCDO00767 359 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 RHCEP18577 417 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 PNLIPRP2P54317 469 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 MOGQ16653 247 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 DCAF10Q5QP82 559 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 RPS19BP1Q86WX3 136 aaKnown RBP16.56■□□□□ 0.24
ATG4B-217ENST00000475693 TAGAPQ8N103 731 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 POGLUT1Q8NBL1 392 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 OR9Q2Q8NGE9 314 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 TBC1D15Q8TC07 691 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 PHF10Q8WUB8 498 aaKnown RBP16.56■□□□□ 0.24
ATG4B-217ENST00000475693 CYGBQ8WWM9 190 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 RELTQ969Z4 430 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 KLHL28Q9NXS3 571 aa16.56■□□□□ 0.24
ATG4B-217ENST00000475693 G3V3Y1 287 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 DNAJB5O75953 348 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 POU2F1P14859 743 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 TBXA2RP21731 343 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ACAA2P42765 397 aaKnown RBP16.55■□□□□ 0.24
ATG4B-217ENST00000475693 PSMD4P55036 377 aaKnown RBP16.55■□□□□ 0.24
ATG4B-217ENST00000475693 FGD3Q5JSP0 725 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 IGF2-ASQ6U949 168 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-217ENST00000475693 MAN2C1Q9NTJ4 1040 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ATMQ13315 3056 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ARGFXA6NJG6 315 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ADAM10O14672 748 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 FADS1O60427 444 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms