RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 RFXAPO00287 272 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 PRSS56P0CW18 603 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 DCTP40126 519 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 SERPINA11Q86U17 422 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 SENP5Q96HI0 755 aaPredicted RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 SGCZQ96LD1 299 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 ETAA1Q9NY74 926 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 ADAM29Q9UKF5 820 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 CCL26Q9Y258 94 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 GMEB1Q9Y692 573 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 EEF1E1-BLOC1S5C9J1V9 151 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 ADAM12O43184 909 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 EEF1E1O43324 174 aaKnown RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 YES1P07947 543 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 CKMT1AP12532 417 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 EIF1P41567 113 aaKnown RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 CD83Q01151 205 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 MICAQ29983 383 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 C18orf21Q32NC0 220 aaPredicted RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 C14orf28Q4W4Y0 310 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 C6orf15Q6UXA7 325 aaPredicted RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 ZNF420Q8TAQ5 688 aaPredicted RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 ASB11Q8WXH4 323 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 MTG2Q9H4K7 406 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 SDHAF2Q9NX18 166 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 SLC1A7O00341 560 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 IFNA1P01562 189 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 ERP29P30040 261 aaKnown RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 SLC35A1P78382 337 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 ERV3-1Q14264 604 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 TSPYL5Q86VY4 417 aaPredicted RBP10.54□□□□□ -0.72
FN1-211ENST00000443816 OR2A12Q8NGT7 310 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 HINT2Q9BX68 163 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 TREM1Q9NP99 234 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 MMACHCQ9Y4U1 282 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 PCDHGA8Q9Y5G5 932 aa10.54□□□□□ -0.72
FN1-211ENST00000443816 ZNF264O43296 627 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 RP2O75695 350 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 F11P03951 625 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 TPMTP51580 245 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 IL10RAQ13651 578 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 FAM180BQ6P0A1 224 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 PRR18Q8N4B5 295 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ULBP2Q9BZM5 246 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 USP36Q9P275 1121 aaKnown RBP10.53□□□□□ -0.72
FN1-211ENST00000443816 MT-CO2P00403 227 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 RETP07949 1114 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 FNTBP49356 437 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 CYB561P49447 251 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 GPR176Q14439 515 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 RNF175Q8N4F7 328 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 MMP27Q9H306 513 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ARNT2Q9HBZ2 717 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 GGT1P19440 569 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 MAGEA3P43357 314 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 KIR2DL3P43628 341 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 GABRA2P47869 451 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 OR1D5P58170 312 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 KCNAB2Q13303 367 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 TECPR1Q7Z6L1 1165 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 OR7D2Q96RA2 312 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 TRAV6A0A075B6T7 132 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 HOXC11O43248 304 aaPredicted RBP10.53□□□□□ -0.72
FN1-211ENST00000443816 TPRA1Q86W33 373 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 FBXL20Q96IG2 436 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 SLC46A1Q96NT5 459 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ZPBPQ9BS86 351 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 DPH1Q9BZG8 443 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ZNF587BE7ETH6 402 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ABLIM3O94929 683 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ZNF182P17025 639 aaPredicted RBP10.53□□□□□ -0.72
FN1-211ENST00000443816 EIF2S3LQ2VIR3 472 aaKnown RBP10.53□□□□□ -0.72
FN1-211ENST00000443816 PARM1Q6UWI2 310 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 CPEB3Q8NE35 698 aaKnown RBP10.53□□□□□ -0.72
FN1-211ENST00000443816 ASB17Q8WXJ9 295 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 CHFRQ96EP1 664 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ACOT13Q9NPJ3 140 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 DNAJC15Q9Y5T4 150 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 PVRP15151 417 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 DLSTP36957 453 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 PITPNBP48739 271 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 CNPY1Q3B7I2 92 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 C22orf42Q6IC83 251 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 OR5D16Q8NGK9 328 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 PRRC1Q96M27 445 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ELOVL3Q9HB03 270 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 IL37Q9NZH6 218 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 PGAP2Q9UHJ9 254 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 TP53TG5Q9Y2B4 290 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ASXL3Q9C0F0 2248 aa10.53□□□□□ -0.72
FN1-211ENST00000443816 ANKRD36A6QL64 1941 aa10.52□□□□□ -0.72
FN1-211ENST00000443816 LRRC30A6NM36 301 aa10.52□□□□□ -0.72
FN1-211ENST00000443816 SUSD5O60279 629 aa10.52□□□□□ -0.72
FN1-211ENST00000443816 ELK4P28324 431 aa10.52□□□□□ -0.72
FN1-211ENST00000443816 CARD18P57730 90 aa10.52□□□□□ -0.72
FN1-211ENST00000443816 FNDC8Q8TC99 324 aa10.52□□□□□ -0.72
FN1-211ENST00000443816 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.72
FN1-211ENST00000443816 FAM71F1Q96KD3 344 aaPredicted RBP10.52□□□□□ -0.72
FN1-211ENST00000443816 PRRX2Q99811 253 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms