RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 C16orf78Q8WTQ4 265 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 FAM216AQ8WUB2 273 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 ZNF75CPQ92670 426 aaPredicted RBP12.21□□□□□ -0.45
LINC00642-202ENST00000442515 C1QTNF6Q9BXI9 259 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 SHCBP1LQ9BZQ2 653 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 FKRPQ9H9S5 495 aa12.21□□□□□ -0.45
LINC00642-202ENST00000442515 NPIPA5A0A0B4J1W7 369 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF724A8MTY0 619 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 NPIPA7E9PJI5 369 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ATP6V1G2-DDX39BF2Z307 99 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 STX16-NPEPL1H3BU86 382 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF195O14628 629 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 STX16O14662 325 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 OTCP00480 354 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 NPIPA8P0DM63 369 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 CHN1P15882 459 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 CHN2P52757 468 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 CDH15P55291 814 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
LINC00642-202ENST00000442515 CD226Q15762 336 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 DEF8Q6ZN54 512 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 GALNT5Q7Z7M9 940 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ZAR1Q86SH2 424 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 MISPQ8IVT2 679 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ATP6V1C2Q8NEY4 427 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 FBXO27Q8NI29 283 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00642-202ENST00000442515 GPR151Q8TDV0 419 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 HPS1Q92902 700 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ELP4Q96EB1 424 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 EBPLQ9BY08 206 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 GLIPR2Q9H4G4 154 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF696Q9H7X3 374 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 ANKZF1Q9H8Y5 726 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 EQTNQ9NQ60 294 aa12.2□□□□□ -0.46
LINC00642-202ENST00000442515 A0A096LPK6 155 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 CCT8L1PA6NM43 557 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 TMPRSS2O15393 492 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 CYTIPO60759 359 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 LILRA1O75019 489 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 RPS17P08708 135 aaKnown RBP12.19□□□□□ -0.46
LINC00642-202ENST00000442515 TACSTD2P09758 323 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 HSD3B1P14060 373 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 TSPAN8P19075 237 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 DDCP20711 480 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 PCMT1P22061 227 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 HSD3B2P26439 372 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 SLC7A1P30825 629 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 TIA1P31483 386 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00642-202ENST00000442515 RAC3P60763 192 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 MLC1Q15049 377 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 AWAT1Q58HT5 328 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 FBXW9Q5XUX1 488 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 SLC46A3Q7Z3Q1 461 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 UBE2J2Q8N2K1 259 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF418Q8TF45 676 aaPredicted RBP12.19□□□□□ -0.46
LINC00642-202ENST00000442515 APIPQ96GX9 242 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 VRK1Q99986 396 aaPredicted RBP12.19□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF225Q9UK10 706 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 SNX12Q9UMY4 172 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 PPP2R2CQ9Y2T4 447 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 SNX24Q9Y343 169 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 RYR3Q15413 4870 aa12.19□□□□□ -0.46
LINC00642-202ENST00000442515 TTC36A6NLP5 189 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 NKX2-2O95096 273 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
LINC00642-202ENST00000442515 STAMBPO95630 424 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 HPGDP15428 266 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 NTSP30990 170 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 DVL1P1P54792 670 aaPredicted RBP12.18□□□□□ -0.46
LINC00642-202ENST00000442515 CDH13P55290 713 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 HILS1P60008 231 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 ZNF117Q03924 483 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 ACSM2AQ08AH3 577 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 TRADDQ15628 312 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 SPIN4Q56A73 249 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 MROH9Q5TGP6 573 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 ACSM2BQ68CK6 577 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 PEG10Q86TG7 708 aaKnown RBP12.18□□□□□ -0.46
LINC00642-202ENST00000442515 MMGT1Q8N4V1 131 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 CDC26Q8NHZ8 85 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 FBXO30Q8TB52 745 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 HOXB13Q92826 284 aaPredicted RBP12.18□□□□□ -0.46
LINC00642-202ENST00000442515 AMDHD1Q96NU7 426 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 RBM4Q9BWF3 364 aaKnown RBP12.18□□□□□ -0.46
LINC00642-202ENST00000442515 ACPTQ9BZG2 426 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 TAS2R16Q9NYV7 291 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 NFU1Q9UMS0 254 aa12.18□□□□□ -0.46
LINC00642-202ENST00000442515 A0A1W2PQD3 144 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 HMX2A2RU54 273 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 ESPNB1AK53 854 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 TRIM77I1YAP6 450 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 MANBAO00462 879 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 SCDO00767 359 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 OR4F21O95013 312 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 NUDT14O95848 222 aa12.17□□□□□ -0.46
LINC00642-202ENST00000442515 GIFP27352 417 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms