RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-210	ENST00000442216	CD8B2	A6NJW9	211 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	BCHE	P06276	602 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	GLI4	P10075	376 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	PSMA4	P25789	261 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	TIMP3	P35625	211 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	NUP107	P57740	925 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	GNGT1	P63211	74 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	PMPCA	Q10713	525 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	SKP2	Q13309	424 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	ART3	Q13508	389 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	NFYC	Q13952	458 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	RIPPLY2	Q5TAB7	128 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	NSUN5P2	Q63ZY6	315 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	CPLX4	Q7Z7G2	160 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	ADGRE4P	Q86SQ3	457 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	MED12L	Q86YW9	2145 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	RPRML	Q8N4K4	120 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	WDR60	Q8WVS4	1066 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	TMEM19	Q96HH6	336 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	TREX2	Q9BQ50	279 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	ELAC2	Q9BQ52	826 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	TMEM38A	Q9H6F2	299 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	ZNF337	Q9Y3M9	751 aa		13.59	□□□□□ -0.23
CSNK1E-210	ENST00000442216	KIAA1549	Q9HCM3	1950 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216		H0Y3Z8	333 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ETV2	O00321	342 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	FBP2	O00757	339 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	OIP5	O43482	229 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	GMFG	O60234	142 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	SNX3	O60493	162 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	NUDT14	O95848	222 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ARAF	P10398	606 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	NID1	P14543	1247 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ETS2	P15036	469 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	IL7R	P16871	459 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	PGC	P20142	388 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	POU3F2	P20265	443 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	DRD4	P21917	467 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ELK4	P28324	431 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	STAR	P49675	285 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	RAC1	P63000	192 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	CYLC2	Q14093	348 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	TRMT5	Q32P41	509 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MMEL1	Q495T6	779 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	SLC25A53	Q5H9E4	307 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	GCNT6	Q5T4J0	391 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MEIOB	Q8N635	442 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	RP9	Q8TA86	221 aa	Known RBP	13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	BBS10	Q8TAM1	723 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ST8SIA1	Q92185	356 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MRGPRX4	Q96LA9	322 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	IFT52	Q9Y366	437 aa		13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.58	□□□□□ -0.24
CSNK1E-210	ENST00000442216	INTS1	Q8N201	2190 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MBD3L3	A6NE82	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	HSPB2	A8KAH6	182 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	C5orf58	C9J3I9	102 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216		H3BML4	177 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	CLDN14	O95500	239 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	THBS1	P07996	1170 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	NUDT7	P0C024	238 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	UBTFL6	P0CB48	400 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	TCEA1	P23193	301 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	CHRNB4	P30926	498 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	CEACAM8	P31997	349 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	SLC6A8	P48029	635 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	GYS2	P54840	703 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	DLX5	P56178	289 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	HSPB2	Q16082	182 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	NDUFAF6	Q330K2	333 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	LIN52	Q52LA3	116 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	REEP3	Q6NUK4	255 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	GRAMD2A	Q8IUY3	354 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	TMCO5A	Q8N6Q1	288 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	PCYOX1L	Q8NBM8	494 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	POC1B	Q8TC44	478 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	TMEM234	Q8WY98	164 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	SDCCAG3	Q96C92	435 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ZFP3	Q96NJ6	502 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	SH3GL1	Q99961	368 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	TUBA1C	Q9BQE3	449 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	THUMPD3	Q9BV44	507 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	QRSL1	Q9H0R6	528 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	IKZF5	Q9H5V7	419 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ARMC7	Q9H6L4	198 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	CACYBP	Q9HB71	228 aa	Known RBP	13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	FAM53C	Q9NYF3	392 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	ZNF232	Q9UNY5	417 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	RNF6	Q9Y252	685 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	HCFC1	P51610	2035 aa		13.57	□□□□□ -0.24
CSNK1E-210	ENST00000442216	PTPN13	Q12923	2485 aa		13.56	□□□□□ -0.24
CSNK1E-210	ENST00000442216	FAAH	O00519	579 aa		13.56	□□□□□ -0.24

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