RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 GLI4P10075 376 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 PEPDP12955 493 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 IL7RP16871 459 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 ZNF708P17019 499 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 GPX2P18283 190 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 PTGER4P35408 488 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 PGM1P36871 562 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 SUMO3P55854 103 aaPredicted RBP18.26■□□□□ 0.51
TSSC4-206ENST00000440813 CLDN18P56856 261 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
TSSC4-206ENST00000440813 SELPLGQ14242 412 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 TMEM44Q2T9K0 475 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 ACSF3Q4G176 576 aaPredicted RBP18.26■□□□□ 0.51
TSSC4-206ENST00000440813 REP15Q6BDI9 236 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 PEX5LQ8IYB4 626 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 ZNF808Q8N4W9 903 aaPredicted RBP18.26■□□□□ 0.51
TSSC4-206ENST00000440813 POU5F2Q8N7G0 328 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 NFKBIDQ8NI38 313 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 GPR119Q8TDV5 335 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 WDR60Q8WVS4 1066 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 RND1Q92730 232 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 PMM1Q92871 262 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 ZBTB8AQ96BR9 441 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 RNF145Q96MT1 663 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 TRIB1Q96RU8 372 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 TUBA1CQ9BQE3 449 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 PHF3Q92576 2039 aaKnown RBP18.26■□□□□ 0.51
TSSC4-206ENST00000440813 DOPEY1Q5JWR5 2465 aa18.26■□□□□ 0.51
TSSC4-206ENST00000440813 A0A0G2JPF8 293 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 BBIP1A8MTZ0 92 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 HNRNPCL2B2RXH8 293 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 HNRNPCL3B7ZW38 293 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 LINC01387J3KSC0 135 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 SLC22A2O15244 555 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 SEC14L5O43304 696 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 HNRNPCL1O60812 293 aaKnown RBP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 DBIP07108 87 aaKnown RBP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 HNRNPCL4P0DMR1 293 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 ZNF17P17021 662 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 RPS4Y1P22090 263 aaKnown RBP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 FOXF1Q12946 379 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 CBFBQ13951 182 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 SF3B4Q15427 424 aaKnown RBP eCLIP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 TRMT5Q32P41 509 aaKnown RBP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 VRK2Q86Y07 508 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 GTPBP8Q8N3Z3 284 aaPredicted RBP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 OR52P1PQ8NH57 321 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 POC1BQ8TC44 478 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 CNOT9Q92600 299 aaKnown RBP18.25■□□□□ 0.51
TSSC4-206ENST00000440813 ZNF524Q96C55 264 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 SDCCAG3Q96C92 435 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 SLC39A3Q9BRY0 314 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 HEATR5AQ86XA9 2040 aa18.25■□□□□ 0.51
TSSC4-206ENST00000440813 DSPPQ9NZW4 1301 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 NCOA6Q14686 2063 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-206ENST00000440813 C7orf72A4D263 438 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 H0YC42 278 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 EPPINO95925 133 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 OPN1LWP04000 364 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 ARAFP10398 606 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 RYKP34925 604 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 SUCLG1P53597 346 aaKnown RBP18.24■□□□□ 0.51
TSSC4-206ENST00000440813 TPD52P55327 224 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-206ENST00000440813 CLDN20P56880 219 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 CDK6Q00534 326 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 QPRTQ15274 297 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 BCL2A1Q16548 175 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 COQ5Q5HYK3 327 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 XKRXQ6PP77 449 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 SEM1Q6ZVN7 128 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 CCDC71Q8IV32 467 aaPredicted RBP18.24■□□□□ 0.51
TSSC4-206ENST00000440813 MEIOBQ8N635 442 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 FAM71CQ8NEG0 241 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 FBXO27Q8NI29 283 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 ZPLD1Q8TCW7 415 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 LRRC58Q96CX6 371 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 CCDC106Q9BWC9 280 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 CACYBPQ9HB71 228 aaKnown RBP18.24■□□□□ 0.51
TSSC4-206ENST00000440813 FAM53CQ9NYF3 392 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 COQ3Q9NZJ6 369 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 AP4B1Q9Y6B7 739 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 ICE1Q9Y2F5 2266 aa18.24■□□□□ 0.51
TSSC4-206ENST00000440813 USP9YO00507 2555 aaPredicted RBP18.23■□□□□ 0.51
TSSC4-206ENST00000440813 SPTAN1Q13813 2472 aaKnown RBP18.23■□□□□ 0.51
TSSC4-206ENST00000440813 SPTBN1Q01082 2364 aaKnown RBP18.23■□□□□ 0.51
TSSC4-206ENST00000440813 PGM3O95394 542 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 CLDN1O95832 211 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 NID1P14543 1247 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 PRKCAP17252 672 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 PSMA4P25789 261 aaKnown RBP18.23■□□□□ 0.51
TSSC4-206ENST00000440813 EIF1P41567 113 aaKnown RBP18.23■□□□□ 0.51
TSSC4-206ENST00000440813 PLAURQ03405 335 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 CDSNQ15517 529 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 CYP51A1Q16850 503 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 LIN52Q52LA3 116 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 MRPL2Q5T653 305 aaKnown RBP18.23■□□□□ 0.51
TSSC4-206ENST00000440813 NSUN5P2Q63ZY6 315 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 NANOGP8Q6NSW7 305 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 PLXDC2Q6UX71 529 aa18.23■□□□□ 0.51
TSSC4-206ENST00000440813 CMIPQ8IY22 773 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms